RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PEPDP12955 493 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ETS2P15036 469 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF17P17021 662 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PRKCAP17252 672 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 IL11P20809 199 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 CHMP24386 653 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 TPD52P55327 224 aaPredicted RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 CLDN18P56856 261 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PCBP3P57721 371 aaKnown RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PSME3P61289 254 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 CBFBQ13951 182 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 VMACQ2NL98 169 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 KRT73Q86Y46 540 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 SLC15A3Q8IY34 581 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ULK2Q8IYT8 1036 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 GTPBP8Q8N3Z3 284 aaPredicted RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PMM1Q92871 262 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ZBTB8AQ96BR9 441 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 WDYHV1Q96HA8 205 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 REXO5Q96IC2 774 aaKnown RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF583Q96ND8 569 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PIGQQ9BRB3 760 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 SPATA9Q9BWV2 254 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 PRDM14Q9GZV8 571 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF337Q9Y3M9 751 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 DOPEY2Q9Y3R5 2298 aa13.02□□□□□ -0.33
HLA-F-229ENST00000489502 SPTBN1Q01082 2364 aaKnown RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 A0A1B0GUH1 482 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 C7orf72A4D263 438 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 TPST1O60507 370 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 GCM2O75603 506 aaPredicted RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 OPN1LWP04000 364 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PRG2P13727 222 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF708P17019 499 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PGCP20142 388 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PSMA4P25789 261 aaKnown RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ACVR2AP27037 513 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 SHC1P29353 583 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 CLDN20P56880 219 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 LIPEQ05469 1076 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 DMTNQ08495 405 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ACSF3Q4G176 576 aaPredicted RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 GLIPR1L2Q4G1C9 344 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 C1orf185Q5T7R7 199 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 POMZP3Q6PJE2 187 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ENPP6Q6UWR7 440 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PLXDC2Q6UX71 529 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ARMC8Q8IUR7 673 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 MARVELD2Q8N4S9 558 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 OR2T12Q8NG77 320 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF563Q8TA94 476 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 TAMM41Q96BW9 452 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 CCDC120Q96HB5 630 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF607Q96SK3 696 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 MEMO1Q9Y316 297 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 IFT52Q9Y366 437 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
HLA-F-229ENST00000489502 PTPN13Q12923 2485 aa13.01□□□□□ -0.33
HLA-F-229ENST00000489502 NCOA6Q14686 2063 aaPredicted RBP13□□□□□ -0.33
HLA-F-229ENST00000489502 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 TNFSF12-TNFSF13A0A0A6YY99 330 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 CLEC18AA5D8T8 446 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 ZG16O60844 167 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 DNAJA2O60884 412 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 WDR1O75083 606 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 NTN1O95631 604 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 EPPINO95925 133 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 ESRRAP11474 423 aaPredicted RBP13□□□□□ -0.33
HLA-F-229ENST00000489502 PRKAR1BP31321 381 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 SFTPDP35247 375 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 GSK3BP49841 420 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 CRYBA2P53672 197 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 SESN3P58005 492 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 SLC25A3Q00325 362 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 HOXC5Q00444 222 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 EPS8Q12929 822 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 KRT72Q14CN4 511 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 DHRS4L2Q6PKH6 230 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 CLEC18BQ6UXF7 455 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 RPTNQ6XPR3 784 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 MICU2Q8IYU8 434 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 FAM26EQ8N5C1 309 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 CLEC18CQ8NCF0 446 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 ST8SIA1Q92185 356 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 DMRTA2Q96SC8 542 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 HOPXQ9BPY8 73 aaPredicted RBP13□□□□□ -0.33
HLA-F-229ENST00000489502 TUBA1CQ9BQE3 449 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 SPATA5L1Q9BVQ7 753 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 ABCD2Q9UBJ2 740 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 PACSIN3Q9UKS6 424 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 ZNF232Q9UNY5 417 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 COL12A1Q99715 3063 aa13□□□□□ -0.33
HLA-F-229ENST00000489502 CFAP73A6NFT4 308 aa12.99□□□□□ -0.33
HLA-F-229ENST00000489502 E9PLN8 166 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms