RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 MFSD9Q8NBP5 474 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 RASL10AQ92737 203 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 CELF6Q96J87 481 aaKnown RBP3.36□□□□□ -1.87
XRN1-213ENST00000489241 SLC38A2Q96QD8 506 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 PSMB7Q99436 277 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 NIPSNAP3BQ9BS92 247 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 SPATA16Q9BXB7 569 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 RHBGQ9H310 441 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 PPDPFQ9H3Y8 114 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 VCPKMTQ9H867 229 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 POLE4Q9NR33 117 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 PNO1Q9NRX1 252 aaKnown RBP3.36□□□□□ -1.87
XRN1-213ENST00000489241 PAK1IP1Q9NWT1 392 aaPredicted RBP3.36□□□□□ -1.87
XRN1-213ENST00000489241 IMPAD1Q9NX62 359 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 DHRS4-AS1Q9P1J3 65 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 RABL2AQ9UBK7 228 aaPredicted RBP3.36□□□□□ -1.87
XRN1-213ENST00000489241 ZNF639Q9UID6 485 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 KANK1Q14678 1352 aa3.36□□□□□ -1.87
XRN1-213ENST00000489241 ATP10AO60312 1499 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 TRAV9-2A0A087WT02 112 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 IGKV3D-20A0A0C4DH25 116 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 A0A1B0GVL5 298 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 GOLGA8OA6NCC3 632 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 PP2D1A8MPX8 630 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 FAM220BPB1ANY3 271 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 GOLGA8NF8WBI6 632 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 MED7O43513 233 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 LATO43561 262 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 PRKAB2O43741 272 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 GALR3O60755 368 aaPredicted RBP3.35□□□□□ -1.87
XRN1-213ENST00000489241 SCRG1O75711 98 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 TSPAN12O95859 305 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
XRN1-213ENST00000489241 H2AFZP0C0S5 128 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 HSMCR30P0CW71 290 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SLC2A3P11169 496 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SFTPCP11686 197 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 MX1P20591 662 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 IMPDH1P20839 514 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SERPINA2P20848 420 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SHC1P29353 583 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 UGT1A5P35504 534 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 FNTAP49354 379 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 HSPA2P54652 639 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 HMGCS2P54868 508 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SLC8A3P57103 927 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 GBE1Q04446 702 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 CUL1Q13616 776 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SLC1A5Q15758 541 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 BEND3Q5T5X7 828 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SLC47A2Q86VL8 602 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 TPRA1Q86W33 373 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 FAM228AQ86W67 206 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 UBE2J2Q8N2K1 259 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 CATSPER1Q8NEC5 780 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 C17orf47Q8NEP4 570 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 OR9K2Q8NGE7 335 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 OR4D9Q8NGE8 314 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 OR1L4Q8NGR5 311 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 ZBED6CLQ96FA7 236 aaPredicted RBP3.35□□□□□ -1.87
XRN1-213ENST00000489241 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 MCCC1Q96RQ3 725 aaPredicted RBP3.35□□□□□ -1.87
XRN1-213ENST00000489241 CYP2S1Q96SQ9 504 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 ANP32EQ9BTT0 268 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 PKIBQ9C010 78 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SUN2Q9UH99 717 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 RIMS3Q9UJD0 308 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 ANGPTL2Q9UKU9 493 aa3.35□□□□□ -1.87
XRN1-213ENST00000489241 SAMD4AQ9UPU9 718 aaKnown RBP3.35□□□□□ -1.87
XRN1-213ENST00000489241 EFCAB7A8K855 629 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 E9PAM4 449 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 E9PLD3 99 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 ZNF253O75346 499 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CIB2O75838 187 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 KBTBD11O94819 623 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 GJB5O95377 273 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 PGK1P00558 417 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 PIGRP01833 764 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 IGHG4P01861 327 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 POLR2EP19388 210 aaKnown RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 BCL3P20749 454 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 ELK3P41970 407 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 TDO2P48775 406 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 DUSP3P51452 185 aaPredicted RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 SUCLG1P53597 346 aaKnown RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 ATP1B3P54709 279 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CDH4P55283 916 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 KRTAP10-3P60369 221 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 DPYSL2Q16555 572 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 LPAL2Q16609 132 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CTSL3PQ5NE16 218 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 PRAMEF5Q5TYX0 476 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 PRAMEF6Q5VXH4 476 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 OR2A2Q6IF42 318 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 UFSP1Q6NVU6 142 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 UQCC3Q6UW78 93 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 VITQ6UXI7 678 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms