RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF350Q9GZX5 532 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 QRSL1Q9H0R6 528 aaKnown RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 NDRG3Q9UGV2 375 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 EMC9Q9Y3B6 208 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 GPR45Q9Y5Y3 372 aa12.54□□□□□ -0.4
VTI1A-206ENST00000489142 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-206ENST00000489142 ITPR3Q14573 2671 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PRAMEF27A3QJZ7 478 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 KIAA0513O60268 411 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-206ENST00000489142 SOX30O94993 753 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 NTN1O95631 604 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 AK1P00568 194 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 CSTAP01040 98 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PGRP06401 933 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 CD8BP10966 210 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ELK4P28324 431 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 CARD18P57730 90 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 CBFBQ13951 182 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF141Q15928 474 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ZNF239Q16600 458 aaKnown RBP12.53□□□□□ -0.4
VTI1A-206ENST00000489142 DPY19L1Q2PZI1 675 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 GPAT3Q53EU6 434 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PDSS1Q5T2R2 415 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ATAD3BQ5T9A4 648 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ATG16L1Q676U5 607 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 HEPHL1Q6MZM0 1159 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PAMR1Q6UXH9 720 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 FRRS1Q6ZNA5 592 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 OR5W2Q8NH69 310 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ABHD3Q8WU67 409 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ROPN1LQ96C74 230 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 ZG16BQ96DA0 208 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 NEURL3Q96EH8 262 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 GMPPAQ96IJ6 420 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-206ENST00000489142 OR52B2Q96RD2 323 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PANX1Q96RD7 426 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 SLC39A3Q9BRY0 314 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 COQ10BQ9H8M1 238 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 PLEKHF2Q9H8W4 249 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 SLC6A13Q9NSD5 602 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 BTNL2Q9UIR0 455 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 WDR45Q9Y484 360 aa12.53□□□□□ -0.4
VTI1A-206ENST00000489142 GPC6Q9Y625 555 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-206ENST00000489142 CCDC154A6NI56 674 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 CLDN24A6NM45 220 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 HMGN4O00479 90 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 CASKO14936 926 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 EIF4E2O60573 245 aaKnown RBP12.52□□□□□ -0.41
VTI1A-206ENST00000489142 H6PDO95479 791 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 KLK2P20151 261 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 DNASE1P24855 282 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 AGTR1P30556 359 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 CHRNEQ04844 493 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 FGFBP1Q14512 234 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 SYPL1Q16563 259 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 TIGD2Q4W5G0 525 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 COX20Q5RI15 118 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 ANKFN1Q8N957 763 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 TOR1AIP2Q8NFQ8 470 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 OR6K3Q8NGY3 331 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 ZFP90Q8TF47 636 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 NINJ1Q92982 152 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 PIK3IP1Q96FE7 263 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 MRGPRX4Q96LA9 322 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 ZBTB18Q99592 522 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 PAQR5Q9NXK6 330 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-206ENST00000489142 ELOVL5Q9NYP7 299 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
VTI1A-206ENST00000489142 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 C16orf97H3BN30 126 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 DIAPH2O60879 1101 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 ATE1O95260 518 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 CD1EP15812 388 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 ENPP1P22413 925 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 ADH6P28332 368 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 SLC7A1P30825 629 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 RYKP34925 604 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 PGM1P36871 562 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 SLC18A1P54219 525 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 SESN3P58005 492 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 PLAURQ03405 335 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 SELENBP1Q13228 472 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 EIF3MQ7L2H7 374 aaKnown RBP12.51□□□□□ -0.41
VTI1A-206ENST00000489142 TUSC5Q8IXB3 177 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 ZNF619Q8N2I2 560 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 OR9I1Q8NGQ6 314 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 RAB3IL1Q8TBN0 382 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
VTI1A-206ENST00000489142 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
VTI1A-206ENST00000489142 REXO5Q96IC2 774 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms