RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TEX37Q96LM6 180 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 CCDC115Q96NT0 180 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 TIGARQ9NQ88 270 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 AIG1Q9NVV5 245 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 THAP1Q9NVV9 213 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 C6orf203Q9P0P8 240 aaPredicted RBP11.22□□□□□ -0.61
SRRM1-216ENST00000489130 METRNQ9UJH8 293 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 MKLN1Q9UL63 735 aa11.22□□□□□ -0.61
SRRM1-216ENST00000489130 MPDZO75970 2070 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 HDAC3O15379 428 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 OR12D1P0DN82 309 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 CD53P19397 219 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 CASP9P55211 416 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 FUT5Q11128 374 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 QPRTQ15274 297 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 RNPS1Q15287 305 aaKnown RBP11.21□□□□□ -0.61
SRRM1-216ENST00000489130 EXOC3L2Q2M3D2 409 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 TYW3Q6IPR3 259 aaKnown RBP11.21□□□□□ -0.61
SRRM1-216ENST00000489130 ZNF550Q7Z398 422 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 SPATA19Q7Z5L4 167 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 TMCO5AQ8N6Q1 288 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 FAM71CQ8NEG0 241 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 RAB3IL1Q8TBN0 382 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 ABHD3Q8WU67 409 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 SLC35A5Q9BS91 424 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 KLHL4Q9C0H6 718 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 LAT2Q9GZY6 243 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 SAP130Q9H0E3 1048 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 COQ10BQ9H8M1 238 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 GP6Q9HCN6 339 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 BTNL2Q9UIR0 455 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 GPR45Q9Y5Y3 372 aa11.21□□□□□ -0.61
SRRM1-216ENST00000489130 AKAP6Q13023 2319 aa11.21□□□□□ -0.62
SRRM1-216ENST00000489130 PRRC2AP48634 2157 aaKnown RBP11.21□□□□□ -0.62
SRRM1-216ENST00000489130 TRPC5OSA6NMA1 111 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 CPSF4O95639 269 aaKnown RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 CSTAP01040 98 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 PGRP06401 933 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 CD99P14209 185 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 PPP3CBP16298 524 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 LOXP28300 417 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 EPHA3P29320 983 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 IL12AP29459 219 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 S100A3P33764 101 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 KHKP50053 298 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 CCR4P51679 360 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 UFM1P61960 85 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 ADAM8P78325 824 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 MAPK14Q16539 360 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 TMEM176BQ3YBM2 270 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 TNFAIP8L2Q6P589 184 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 STAC2Q6ZMT1 411 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 BEND4Q6ZU67 534 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 C22orf34Q6ZV56 151 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 EIF3MQ7L2H7 374 aaKnown RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 OLIG3Q7RTU3 272 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 STK32CQ86UX6 486 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 RFWD2Q8NHY2 731 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 MGARPQ8TDB4 240 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 XAGE5Q8WWM1 108 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 ROBO4Q8WZ75 1007 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 ST8SIA1Q92185 356 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 RAB8BQ92930 207 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 ROPN1LQ96C74 230 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 REXO5Q96IC2 774 aaKnown RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 THUMPD3Q9BV44 507 aaKnown RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 OR10A4Q9H209 315 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 FANCFQ9NPI8 374 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 BEX4Q9NWD9 120 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-216ENST00000489130 KLHL13Q9P2N7 655 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 SLC35A3Q9Y2D2 325 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 WDR45Q9Y484 360 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
SRRM1-216ENST00000489130 ABCA4P78363 2273 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PRAMEF27A3QJZ7 478 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 CCDC154A6NI56 674 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 SLCO1B7G3V0H7 640 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 HMGN4O00479 90 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 THBDP07204 575 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 UBTFL6P0CB48 400 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 KLK2P20151 261 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PSMB1P20618 241 aaKnown RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 CHI3L1P36222 383 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PGM1P36871 562 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 NME5P56597 212 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 RAC3P60763 192 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TXNL4AP83876 142 aaKnown RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 LRRC74AQ0VAA2 488 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TIGD2Q4W5G0 525 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TMEM201Q5SNT2 666 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 BEND6Q5SZJ8 279 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ATG16L1Q676U5 607 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms