RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ENTHD1Q8IYW4 607 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 TRMT10AQ8TBZ6 339 aaKnown RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 SPRYD4Q8WW59 207 aaPredicted RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 MYLPFQ96A32 169 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 IL4I1Q96RQ9 567 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 TESK2Q96S53 571 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 FEM1AQ9BSK4 669 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 TBC1D10AQ9BXI6 508 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 GLT8D2Q9H1C3 349 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 CALHM2Q9HA72 323 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 MYOZ2Q9NPC6 264 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 PNO1Q9NRX1 252 aaKnown RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 SMPD3Q9NY59 655 aaPredicted RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 GALPQ9UBC7 116 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 MRPS33Q9Y291 106 aaKnown RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 EXOSC1Q9Y3B2 195 aaKnown RBP2.31□□□□□ -2.04
RFC4-213ENST00000489028 USP6P35125 1406 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 CDC42BPBQ9Y5S2 1711 aa2.31□□□□□ -2.04
RFC4-213ENST00000489028 CASKO14936 926 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 CTAGE5O15320 804 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 TM9SF1O15321 606 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 DUX1O43812 170 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 TPST2O60704 377 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 STX11O75558 287 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SCRG1O75711 98 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SNX4O95219 450 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 JCHAINP01591 159 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 IGKV3-11P04433 115 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 TPM2P07951 284 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 IQCF3P0C7M6 154 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ANXA3P12429 323 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 BCKDHAP12694 445 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 RGS4P49798 205 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SLC26A2P50443 739 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 LIM2P55344 173 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 RPL32P62910 135 aaKnown RBP2.3□□□□□ -2.04
RFC4-213ENST00000489028 CSTF1Q05048 431 aaKnown RBP2.3□□□□□ -2.04
RFC4-213ENST00000489028 DPYSL3Q14195 570 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 MESDQ14696 234 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 CYP51A1Q16850 503 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 MAJINQ3KP22 176 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 LINC01620Q4KN68 170 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 RABGAP1LQ5R372 815 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 PMF1Q6P1K2 205 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 TIFABQ6ZNK6 161 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 FRA10AC1Q70Z53 315 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ANKRD37Q7Z713 158 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 TMEM179BQ7Z7N9 219 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ZNF683Q8IZ20 524 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ZNF433Q8N7K0 673 aaPredicted RBP2.3□□□□□ -2.04
RFC4-213ENST00000489028 FAM133AQ8N9E0 248 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SYT14Q8NB59 555 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 BBS1Q8NFJ9 593 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 OR2T3Q8NH03 318 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ART4Q93070 314 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 MARC2Q969Z3 335 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ADIPOR1Q96A54 375 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SDSLQ96GA7 329 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 ZBTB18Q99592 522 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 OMDQ99983 421 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 EBF4Q9BQW3 602 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 COMMD4Q9H0A8 199 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SLC25A51Q9H1U9 297 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 OR51J1Q9H342 316 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 EHFQ9NZC4 300 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 CHRNA9Q9UGM1 479 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 WDR45Q9Y484 360 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 SPACA6W5XKT8 324 aa2.3□□□□□ -2.04
RFC4-213ENST00000489028 PTCH1Q13635 1447 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 A0A1W2PNV4 684 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 PCP4L1A6NKN8 68 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 K7ENP7 123 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 UBXN8O00124 270 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 CXCL11O14625 94 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 ZSCAN12O43309 604 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 PPIHO43447 177 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 OR1F1O43749 312 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 RAMP1O60894 148 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 TM7SF2O76062 418 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 TIMP1P01033 207 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 OPN1LWP04000 364 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 DBTP11182 482 aaKnown RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 CALB2P22676 271 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 PAX7P23759 505 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 CCNE1P24864 410 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 NTHL1P78549 312 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 CNTN2Q02246 1040 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 EGFEM1PQ0D2K5 195 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 PJVKQ0ZLH3 352 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 ATXN7L3Q14CW9 347 aaPredicted RBP2.29□□□□□ -2.04
RFC4-213ENST00000489028 ZMYND11Q15326 602 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 UBE2V2Q15819 145 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 MAPK6Q16659 721 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 EXOC3L2Q2M3D2 409 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 TMEM52BQ4KMG9 183 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 DCST2Q5T1A1 773 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
RFC4-213ENST00000489028 SLX4IPQ5VYV7 408 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms