RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 RAC1P63000 192 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 IRX1P78414 480 aaPredicted RBP21.29■■□□□ 1
RHBDD3-205ENST00000488106 PAGE3Q5JUK9 113 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 GDF7Q7Z4P5 450 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 LILRA2Q8N149 483 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 ACBD4Q8NC06 268 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 SFXN3Q9BWM7 321 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 SLC35A3Q9Y2D2 325 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 POLQO75417 2590 aa21.29■■□□□ 1
RHBDD3-205ENST00000488106 CLIC1O00299 241 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 VIMP08670 466 aaKnown RBP21.28■■□□□ 1
RHBDD3-205ENST00000488106 HOXB9P17482 250 aaPredicted RBP21.28■■□□□ 1
RHBDD3-205ENST00000488106 ELK4P28324 431 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 SHC1P29353 583 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 MAGEA8P43361 318 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 SNTB1Q13884 538 aaKnown RBP21.28■■□□□ 1
RHBDD3-205ENST00000488106 MAPK11Q15759 364 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 CTU2Q2VPK5 515 aaKnown RBP21.28■■□□□ 1
RHBDD3-205ENST00000488106 FAM71CQ8NEG0 241 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 ATP6V1C2Q8NEY4 427 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 OR10D3Q8NH80 312 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 WDR60Q8WVS4 1066 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 OIT3Q8WWZ8 545 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 RABEP2Q9H5N1 569 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 ZNF385DQ9H6B1 395 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 SLC52A3Q9NQ40 469 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.28■■□□□ 1
RHBDD3-205ENST00000488106 SLC25A37Q9NYZ2 338 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 SLAMF8Q9P0V8 285 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 ZNF175Q9Y473 711 aa21.28■■□□□ 1
RHBDD3-205ENST00000488106 AGAP5A6NIR3 686 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 CXCL13O43927 109 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 IL18BPO95998 194 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 DLX5P56178 289 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 RPS26P11Q5JNZ5 115 aaPredicted RBP21.27■■□□□ 1
RHBDD3-205ENST00000488106 LRIF1Q5T3J3 769 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 OR2A2Q6IF42 318 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 ESPNLQ6ZVH7 1005 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 MSRB3Q8IXL7 192 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 DMRTC2Q8IXT2 367 aaPredicted RBP21.27■■□□□ 1
RHBDD3-205ENST00000488106 CNEP1R1Q8N9A8 125 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 OR2V1Q8NHB1 315 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 LRRC46Q96FV0 321 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 ADGRG7Q96K78 797 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 MRGPRX4Q96LA9 322 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 KLHL15Q96M94 604 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 TREX2Q9BQ50 279 aaPredicted RBP21.27■■□□□ 1
RHBDD3-205ENST00000488106 PRRG4Q9BZD6 226 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 RAD21L1Q9H4I0 556 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 TMEM45AQ9NWC5 275 aa21.27■■□□□ 1
RHBDD3-205ENST00000488106 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 A0A0J9YW62 118 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 A0A1W2PNV4 684 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 EFNA2O43921 213 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 NUDT7P0C024 238 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 PGCP20142 388 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 ADH6P28332 368 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 RYKP34925 604 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 CRISP3P54108 245 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 SIRPAP78324 504 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 KCNJ10P78508 379 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 PLAURQ03405 335 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 RGNQ15493 299 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 AP1ARQ63HQ0 302 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 HBMQ6B0K9 141 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 CGB2Q6NT52 195 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 LUZP2Q86TE4 346 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 ZNF295-AS1Q8N0V1 137 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 SLC38A5Q8WUX1 472 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 TMEM19Q96HH6 336 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 CALML5Q9NZT1 146 aa21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 HRNRQ86YZ3 2850 aaPredicted RBP21.26■□□□□ 0.99
RHBDD3-205ENST00000488106 CSMD2Q7Z408 3487 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 A0A1W2PP18 115 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 TMEM247A6NEH6 219 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 TNFSF13O75888 250 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 AQP8O94778 261 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 NTN1O95631 604 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 TFPTP0C1Z6 253 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 FCGR2AP12318 317 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 IL7RP16871 459 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 RPS4Y1P22090 263 aaKnown RBP21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 SLC6A8P48029 635 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 CPA2P48052 419 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 SESN3P58005 492 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 SELENBP1Q13228 472 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 SLC25A53Q5H9E4 307 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 PEX5LQ8IYB4 626 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 ZNF563Q8TA94 476 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 ST8SIA1Q92185 356 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 CNOT9Q92600 299 aaKnown RBP21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 RNASE6Q93091 150 aaKnown RBP21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 MTHFD2LQ9H903 347 aaPredicted RBP21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 VAPAQ9P0L0 249 aa21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 MCTS1Q9ULC4 181 aaKnown RBP21.25■□□□□ 0.99
RHBDD3-205ENST00000488106 CSMD1Q96PZ7 3565 aa21.24■□□□□ 0.99
RHBDD3-205ENST00000488106 ADAMDEC1O15204 470 aa21.24■□□□□ 0.99
RHBDD3-205ENST00000488106 DNAJA2O60884 412 aa21.24■□□□□ 0.99
RHBDD3-205ENST00000488106 SYNGR4O95473 234 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms