RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PGCP20142 388 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 CCR4P51679 360 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 CHRNB3Q05901 458 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 TOMM34Q15785 309 aaPredicted RBP8.7□□□□□ -1.02
MCF2L-227ENST00000486806 INAQ16352 499 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 PLPPR5Q32ZL2 321 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ENTPD8Q5MY95 495 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 SLC6A19Q695T7 634 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 RPUSD3Q6P087 351 aaKnown RBP8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ZFP1Q6P2D0 407 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 PCSK4Q6UW60 755 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ARSKQ6UWY0 536 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 DEF8Q6ZN54 512 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ZDHHC21Q8IVQ6 265 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 OFCC1Q8IZS5 231 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 OR4K17Q8NGC6 315 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ADAMTS16Q8TE57 1224 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 GNRHR2Q96P88 292 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 MCHR1Q99705 422 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF559Q9BR84 538 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ARHGAP9Q9BRR9 750 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 DSN1Q9H410 356 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 MED17Q9NVC6 651 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 B3GNT3Q9Y2A9 372 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 NTNG1Q9Y2I2 539 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
MCF2L-227ENST00000486806 CACNA1GO43497 2377 aa8.7□□□□□ -1.02
MCF2L-227ENST00000486806 ATMQ13315 3056 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PKD1L2Q7Z442 2459 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 A0A087WZY1 265 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 A0A1B0GWA3 101 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 C7orf72A4D263 438 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 CPSF4LA6NMK7 179 aaKnown RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 GMFGO60234 142 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 CBR3O75828 277 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 KRT36O76013 467 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 OR5F1O95221 314 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 LYPD3O95274 346 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 WISP1O95388 367 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 UQCRBP14927 111 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PRKCAP17252 672 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ITGA2P17301 1181 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 RHCEP18577 417 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 FUT4P22083 530 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 SRD5A2P31213 254 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 RYKP34925 604 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 SLC1A3P43003 542 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 IDH2P48735 452 aaKnown RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 DSCR4P56555 118 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PMP22Q01453 160 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 FOXF1Q12946 379 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PIN1Q13526 163 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 QPRTQ15274 297 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 OR1Q1Q15612 314 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 TMEM44Q2T9K0 475 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 SLC25A53Q5H9E4 307 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 WBP2NLQ6ICG8 309 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 AAGABQ6PD74 315 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF613Q6PF04 617 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PLEKHM3Q6ZWE6 761 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 C10orf67Q8IYJ2 551 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 TMEM251Q8N6I4 163 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 Q8NA96 180 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ST8SIA1Q92185 356 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 SLC39A7Q92504 469 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PNPLA2Q96AD5 504 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 C3orf49Q96BT1 292 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 JSRP1Q96MG2 331 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF347Q96SE7 839 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 NPAS1Q99742 590 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PIP5K1AQ99755 562 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PRR14Q9BWN1 585 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 TRIM2Q9C040 744 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 OR2B2Q9GZK3 357 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ADAM19Q9H013 955 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 PTGES2Q9H7Z7 377 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 S100A14Q9HCY8 104 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF71Q9NQZ8 489 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-227ENST00000486806 AGPAT4Q9NRZ5 378 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 MAN2C1Q9NTJ4 1040 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 ACER3Q9NUN7 267 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 TAS2R10Q9NYW0 307 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 B4GALT7Q9UBV7 327 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 AP4S1Q9Y587 144 aa8.69□□□□□ -1.02
MCF2L-227ENST00000486806 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 A0A1W2PRQ8 180 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 TRAPPC13A5PLN9 417 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 CHP2O43745 196 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 ZIC3O60481 467 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 CDC40O60508 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
MCF2L-227ENST00000486806 TIPRLO75663 272 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 DIRAS1O95057 198 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 NUDT14O95848 222 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 HPNP05981 417 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 THRBP10828 461 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 FCGR1AP12314 374 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 ZNF17P17021 662 aa8.68□□□□□ -1.02
MCF2L-227ENST00000486806 DPP4P27487 766 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms