RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GNRHR2Q96P88 292 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 FAM173AQ9BQD7 235 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 PPP4R1LQ9P1A2 415 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 FBXL2Q9UKC9 423 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
HDAC6-229ENST00000486665 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-229ENST00000486665 CRYBG3Q68DQ2 2970 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 CELSR2Q9HCU4 2923 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 DPM1O60762 260 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 RFPL3SP0C7P2 107 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ENDOUP21128 410 aaKnown RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 RFC3P40938 356 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 MASP1P48740 699 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ACTR3P61158 418 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF169Q14929 603 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 IFI44LQ53G44 452 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 EIPR1Q53HC9 387 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 FKBP9P1Q75LS8 142 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 TSPYL5Q86VY4 417 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ATCAYQ86WG3 371 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 PLCZ1Q86YW0 608 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 TMEM178AQ8NBL3 297 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 OR1J4Q8NGS1 313 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 OR5W2Q8NH69 310 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 GPR119Q8TDV5 335 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 CANT1Q8WVQ1 401 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 C7orf34Q96L11 122 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 SEPHS2Q99611 448 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 AMBRA1Q9C0C7 1298 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ARMC7Q9H6L4 198 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ZFP64Q9NPA5 681 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 EXOSC3Q9NQT5 275 aaKnown RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 KLHL28Q9NXS3 571 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 PLEKHB1Q9UF11 243 aaPredicted RBP11.62□□□□□ -0.55
HDAC6-229ENST00000486665 PCDHGB6Q9Y5F9 930 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 ESPL1Q14674 2120 aa11.62□□□□□ -0.55
HDAC6-229ENST00000486665 DHRS12A0PJE2 317 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 CDC40O60508 579 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC6-229ENST00000486665 GLSO94925 669 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-229ENST00000486665 HTR2AP28223 471 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 MSX1P28360 303 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 RYKP34925 604 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 P2RX1P51575 399 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
HDAC6-229ENST00000486665 PMP22Q01453 160 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 EPS8Q12929 822 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 IQCCQ4KMZ1 466 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 RNFT1Q5M7Z0 435 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 ARSKQ6UWY0 536 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF550Q7Z398 422 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 TMCO5AQ8N6Q1 288 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 OR4K17Q8NGC6 315 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 CPT1CQ8TCG5 803 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 GEMIN6Q8WXD5 167 aaKnown RBP11.61□□□□□ -0.55
HDAC6-229ENST00000486665 SLC47A1Q96FL8 570 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF597Q96LX8 424 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 UGT2B28Q9BY64 529 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 LUZP4Q9P127 313 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 B3GNT3Q9Y2A9 372 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 EML6Q6ZMW3 1958 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 LRBAP50851 2863 aa11.61□□□□□ -0.55
HDAC6-229ENST00000486665 CSMD1Q96PZ7 3565 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 CACNA1DQ01668 2161 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 TTLL8A6PVC2 850 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 J3KTA2 159 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 ENTPD5O75356 428 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 MT-ND1P03886 318 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 GPIP06744 558 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 LINGO3P0C6S8 592 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 UMPSP11172 480 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 FUT4P22083 530 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 YAP1P46937 504 aaKnown RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 CCR4P51679 360 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 VLDLRP98155 873 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 SLC6A19Q695T7 634 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 ZFP62Q8NB50 900 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 TOR1AIP2Q8NFQ8 470 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 PHF10Q8WUB8 498 aaKnown RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 SLC35B4Q969S0 331 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 C1GALT1C1Q96EU7 318 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 MCHR1Q99705 422 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 NPAS1Q99742 590 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 TTTY12Q9BZ98 90 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 MAGIXQ9H6Y5 334 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 EVA1AQ9H8M9 152 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 CTPS2Q9NRF8 586 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 CCM2LQ9NUG4 571 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 NDUFAF4Q9P032 175 aa11.6□□□□□ -0.55
HDAC6-229ENST00000486665 BOKQ9UMX3 212 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-229ENST00000486665 AURKCQ9UQB9 309 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms