RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 HS6ST1O60243 411 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 IFNW1P05000 195 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 PRKAR1AP10644 381 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 RHCEP18577 417 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 HTR2AP28223 471 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 EVI2BP34910 448 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 RYKP34925 604 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 LIMS1P48059 325 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 ALDH3B2P48448 385 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 ST13P50502 369 aaKnown RBP10.35□□□□□ -0.75
SND1-212ENST00000485871 SSR4P51571 173 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 GABARAPL2P60520 117 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 SKP2Q13309 424 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 KEAP1Q14145 624 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 ZSWIM7Q19AV6 140 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 NDUFAF6Q330K2 333 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 TBPL2Q6SJ96 375 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 TMEM179BQ7Z7N9 219 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 ZNF614Q8N883 585 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 OR10G3Q8NGC4 313 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 OR4C15Q8NGM1 316 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 HDAC2Q92769 488 aaKnown RBP10.35□□□□□ -0.75
SND1-212ENST00000485871 CCNL2Q96S94 520 aaPredicted RBP10.35□□□□□ -0.75
SND1-212ENST00000485871 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 TUBA1CQ9BQE3 449 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 FUZQ9BT04 418 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 YIPF3Q9GZM5 350 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 TOR3AQ9H497 397 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 PROK2Q9HC23 129 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 EXOSC3Q9NQT5 275 aaKnown RBP10.35□□□□□ -0.75
SND1-212ENST00000485871 FAM118AQ9NWS6 357 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 POLHQ9Y253 713 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 SLC35A3Q9Y2D2 325 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 SLC9A8Q9Y2E8 581 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 NCKAP5O14513 1909 aa10.35□□□□□ -0.75
SND1-212ENST00000485871 C17orf51A8MQB3 221 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 SCDO00767 359 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 FMO6PO60774 539 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 MRPS14O60783 128 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 LYPD3O95274 346 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ANGPTL1O95841 491 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 CSTAP01040 98 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 THY1P04216 161 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ATP6V1B1P15313 513 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 IGFBP5P24593 272 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ITPKBP27987 946 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 EIF2S3P41091 472 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 YAP1P46937 504 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 HLCSP50747 726 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 HMGA2P52926 109 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 RRADP55042 308 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 RGS8P57771 180 aaPredicted RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 MEP1AQ16819 746 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 NADK2Q4G0N4 442 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 FOXB2Q5VYV0 432 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 CBLN3Q6UW01 205 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 MARCH3Q86UD3 253 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 SATL1Q86VE3 508 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 SPACA3Q8IXA5 215 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 DND1Q8IYX4 353 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 BEST3Q8N1M1 668 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 GATSQ8NAP1 163 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ZNF527Q8NB42 609 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 PIK3C3Q8NEB9 887 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 PAQR8Q8TEZ7 354 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ASB15Q8WXK1 588 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ZNF524Q96C55 264 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 TMCO6Q96DC7 493 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ARSGQ96EG1 525 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 PRRC1Q96M27 445 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 FRMD6Q96NE9 622 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 SECISBP2Q96T21 854 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 PRR14Q9BWN1 585 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 GRIP2Q9C0E4 1043 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 CACYBPQ9HB71 228 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 MAN2C1Q9NTJ4 1040 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 ACER3Q9NUN7 267 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 KLHL28Q9NXS3 571 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 PTTG2Q9NZH5 202 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 KIF17Q9P2E2 1029 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 TESQ9UGI8 421 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 NTNG1Q9Y2I2 539 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 SAMHD1Q9Y3Z3 626 aaKnown RBP10.34□□□□□ -0.75
SND1-212ENST00000485871 MPDZO75970 2070 aa10.34□□□□□ -0.75
SND1-212ENST00000485871 IGLV3-32A0A0A0MS00 114 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 ARRDC5A6NEK1 342 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 AP3D1O14617 1153 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 RRP8O43159 456 aaKnown RBP10.33□□□□□ -0.76
SND1-212ENST00000485871 ZNF264O43296 627 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 CEACAM4O75871 244 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 GNAO1P09471 354 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 GKN3PP0CG01 181 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 CCL3P10147 92 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 UBL4AP11441 157 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 ANXA8P13928 327 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 ITGA3P26006 1051 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 RRM2P31350 389 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 CASP3P42574 277 aa10.33□□□□□ -0.76
SND1-212ENST00000485871 IST1P53990 364 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms