RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 GNA13Q14344 377 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 KRT72Q14CN4 511 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 LARS2Q15031 903 aaKnown RBP10.74□□□□□ -0.69
APTX-227ENST00000485479 DOLPP1Q86YN1 238 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 ARMC8Q8IUR7 673 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 LACC1Q8IV20 430 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 MISPQ8IVT2 679 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 CADM2Q8N3J6 435 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 ZNF563Q8TA94 476 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 CDRT15Q96T59 188 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 SPAG4Q9NPE6 437 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 QPCTLQ9NXS2 382 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 SUCOQ9UBS9 1254 aaKnown RBP10.74□□□□□ -0.69
APTX-227ENST00000485479 SLC35A3Q9Y2D2 325 aa10.74□□□□□ -0.69
APTX-227ENST00000485479 A0A1B0GVC2 190 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 FAM220BPB1ANY3 271 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 AQP7O14520 342 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 EFNA2O43921 213 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 HCN1O60741 890 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 MFN2O95140 757 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 PRKCAP17252 672 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 CPOXP36551 454 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 IDH2P48735 452 aaKnown RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 LHX2P50458 406 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 CLDN15P56746 228 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 CBFBQ13951 182 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 VASNQ6EMK4 673 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 HACD2Q6Y1H2 254 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 RBM45Q8IUH3 476 aaKnown RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 MICU2Q8IYU8 434 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 TOR1AIP2Q8NFQ8 470 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 FAM57AQ8TBR7 257 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 CLPTM1LQ96KA5 538 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 HOPXQ9BPY8 73 aaPredicted RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 KCTD14Q9BQ13 255 aaPredicted RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 LAT2Q9GZY6 243 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 ABCD2Q9UBJ2 740 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 ERRFI1Q9UJM3 462 aaPredicted RBP10.73□□□□□ -0.69
APTX-227ENST00000485479 V9GYQ6 96 aa10.73□□□□□ -0.69
APTX-227ENST00000485479 ELOVL7A1L3X0 281 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 CCL21O00585 134 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 DNAJA2O60884 412 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PDE5AO76074 875 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 NTN1O95631 604 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ETS2P15036 469 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 POU3F2P20265 443 aaPredicted RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 ADH7P40394 386 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 SESN3P58005 492 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 RBPJQ06330 500 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 RBBP4Q09028 425 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 GANABQ14697 944 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 AP1ARQ63HQ0 302 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PPP4R4Q6NUP7 873 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 KRT73Q86Y46 540 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PGAM4Q8N0Y7 254 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 MARVELD2Q8N4S9 558 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 OR4D11Q8NGI4 311 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 WDYHV1Q96HA8 205 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ZNF607Q96SK3 696 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 CACYBPQ9HB71 228 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 TMEM181Q9P2C4 612 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ZNF835Q9Y2P0 537 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 UTP20O75691 2785 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 CFAP73A6NFT4 308 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PRRG2O14669 202 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 EIF4E2O60573 245 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 TPST2O60704 377 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 THBS1P07996 1170 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 GUSBP08236 651 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 CALB2P22676 271 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PSMA4P25789 261 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 ACAA2P42765 397 aaKnown RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 OR1E2P47887 323 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 CLDN18P56856 261 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 EPS8Q12929 822 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 RNF220Q5VTB9 566 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PRAMEF8Q5VWM4 474 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PRAMEF7Q5VXH5 474 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 RPTNQ6XPR3 784 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ARPINQ7Z6K5 226 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 SLC26A7Q8TE54 656 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 SARAFQ96BY9 339 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ZNF845Q96IR2 970 aaPredicted RBP10.72□□□□□ -0.69
APTX-227ENST00000485479 TPD52L3Q96J77 140 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PIGQQ9BRB3 760 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 PCDHAC1Q9H158 963 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 ZNF232Q9UNY5 417 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 IFT52Q9Y366 437 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 FAM215AQ9Y5M1 114 aa10.72□□□□□ -0.69
APTX-227ENST00000485479 A0A1W2PNR3 127 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 TMEM229AB2RXF0 380 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 EIF1AYO14602 144 aaKnown RBP10.71□□□□□ -0.69
APTX-227ENST00000485479 TNFSF11O14788 317 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 CD247P20963 164 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 HTR2AP28223 471 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 MSX1P28360 303 aa10.71□□□□□ -0.69
APTX-227ENST00000485479 CA7P43166 264 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms