RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 OR2V1Q8NHB1 315 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 STARD4Q96DR4 205 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 AURKBQ96GD4 344 aaPredicted RBP11.02□□□□□ -0.65
MSH5-216ENST00000484309 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 GPATCH1Q9BRR8 931 aaKnown RBP11.02□□□□□ -0.65
MSH5-216ENST00000484309 RNF122Q9H9V4 155 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 STOML1Q9UBI4 398 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
MSH5-216ENST00000484309 ZNF175Q9Y473 711 aa11.02□□□□□ -0.65
MSH5-216ENST00000484309 CSMD2Q7Z408 3487 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 TUBAL3A6NHL2 446 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 SYNGR4O95473 234 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 CHRM4P08173 479 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 ETFAP13804 333 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 RYKP34925 604 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 EIF1P41567 113 aaKnown RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 STX1BP61266 288 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 CBFBQ13951 182 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 TMEM176BQ3YBM2 270 aaPredicted RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 ESPNLQ6ZVH7 1005 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 EIF3MQ7L2H7 374 aaKnown RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 CDH24Q86UP0 819 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 KIF18BQ86Y91 864 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 ZFP90Q8TF47 636 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 ROBO4Q8WZ75 1007 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 ITCHQ96J02 903 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 SRXN1Q9BYN0 137 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 LAT2Q9GZY6 243 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 PIGMQ9H3S5 423 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
MSH5-216ENST00000484309 MCTS1Q9ULC4 181 aaKnown RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 GPC6Q9Y625 555 aaPredicted RBP11.01□□□□□ -0.65
MSH5-216ENST00000484309 PRR14LQ5THK1 2151 aa11□□□□□ -0.65
MSH5-216ENST00000484309 UQCRHLA0A096LP55 91 aa11□□□□□ -0.65
MSH5-216ENST00000484309 A0A1W2PNR3 127 aa11□□□□□ -0.65
MSH5-216ENST00000484309 FAM234BA2RU67 622 aa11□□□□□ -0.65
MSH5-216ENST00000484309 A8MXE2 369 aa11□□□□□ -0.65
MSH5-216ENST00000484309 NR5A2O00482 541 aa11□□□□□ -0.65
MSH5-216ENST00000484309 ADAMDEC1O15204 470 aa11□□□□□ -0.65
MSH5-216ENST00000484309 KRT75O95678 551 aa11□□□□□ -0.65
MSH5-216ENST00000484309 PLGP00747 810 aaPredicted RBP11□□□□□ -0.65
MSH5-216ENST00000484309 CRHP06850 196 aa11□□□□□ -0.65
MSH5-216ENST00000484309 NR2F1P10589 423 aa11□□□□□ -0.65
MSH5-216ENST00000484309 FCGR2AP12318 317 aa11□□□□□ -0.65
MSH5-216ENST00000484309 CD1EP15812 388 aa11□□□□□ -0.65
MSH5-216ENST00000484309 ELK4P28324 431 aa11□□□□□ -0.65
MSH5-216ENST00000484309 PGM1P36871 562 aa11□□□□□ -0.65
MSH5-216ENST00000484309 CRATP43155 626 aa11□□□□□ -0.65
MSH5-216ENST00000484309 PLAURQ03405 335 aa11□□□□□ -0.65
MSH5-216ENST00000484309 FAM27E3Q08E93 113 aa11□□□□□ -0.65
MSH5-216ENST00000484309 LRRC74AQ0VAA2 488 aa11□□□□□ -0.65
MSH5-216ENST00000484309 PDSS1Q5T2R2 415 aa11□□□□□ -0.65
MSH5-216ENST00000484309 CNOT9Q92600 299 aaKnown RBP11□□□□□ -0.65
MSH5-216ENST00000484309 OSTF1Q92882 214 aa11□□□□□ -0.65
MSH5-216ENST00000484309 DNAJA3Q96EY1 480 aa11□□□□□ -0.65
MSH5-216ENST00000484309 MAGEB18Q96M61 343 aa11□□□□□ -0.65
MSH5-216ENST00000484309 POLDIP3Q9BY77 421 aaKnown RBP11□□□□□ -0.65
MSH5-216ENST00000484309 SAP130Q9H0E3 1048 aa11□□□□□ -0.65
MSH5-216ENST00000484309 SLC38A1Q9H2H9 487 aa11□□□□□ -0.65
MSH5-216ENST00000484309 RMND5AQ9H871 391 aa11□□□□□ -0.65
MSH5-216ENST00000484309 COQ10BQ9H8M1 238 aa11□□□□□ -0.65
MSH5-216ENST00000484309 TPT1P8Q9HAU6 139 aa11□□□□□ -0.65
MSH5-216ENST00000484309 POLE3Q9NRF9 147 aa11□□□□□ -0.65
MSH5-216ENST00000484309 DNAJB12Q9NXW2 375 aaKnown RBP11□□□□□ -0.65
MSH5-216ENST00000484309 PROCRQ9UNN8 238 aa11□□□□□ -0.65
MSH5-216ENST00000484309 IGHV3-15A0A0B4J1V0 119 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 A6NNC1 897 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 MSTNO14793 375 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 CTAG2O75638 210 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 TGDSO95455 350 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 NTN1O95631 604 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 BCHEP06276 602 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 PGCP20142 388 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 PEX19P40855 299 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 KCNJ5P48544 419 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ANXA11P50995 505 aaKnown RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 MVDP53602 400 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 CTBP2P56545 445 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 CARD18P57730 90 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 SESN3P58005 492 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 DSTNP60981 165 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 KCNJ10P78508 379 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 SORDQ00796 357 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 MERTKQ12866 999 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 SELENBP1Q13228 472 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 POU4F3Q15319 338 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 MAPK11Q15759 364 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ZNF239Q16600 458 aaKnown RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 EXOC3L2Q2M3D2 409 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 RPS26P11Q5JNZ5 115 aaPredicted RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 ZNF474Q6S9Z5 364 aaPredicted RBP10.99□□□□□ -0.65
MSH5-216ENST00000484309 FAM214BQ7L5A3 538 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 FUNDC1Q8IVP5 155 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ZNF610Q8N9Z0 462 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 FAM71CQ8NEG0 241 aa10.99□□□□□ -0.65
MSH5-216ENST00000484309 ZNF563Q8TA94 476 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms