RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZNF572Q7Z3I7 529 aaPredicted RBP11.32□□□□□ -0.6
UBR4-213ENST00000483922 MISPQ8IVT2 679 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 SLC43A2Q8N370 569 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 MMGT1Q8N4V1 131 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 WDR31Q8NA23 367 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 CEP70Q8NHQ1 597 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 FAM76AQ8TAV0 307 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 PHOSPHO1Q8TCT1 267 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 CDS1Q92903 461 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 FCRL1Q96LA6 429 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 CHODLQ9H9P2 273 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 EML4Q9HC35 981 aaKnown RBP11.32□□□□□ -0.6
UBR4-213ENST00000483922 MID1IP1Q9NPA3 183 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 BAIAP2L1Q9UHR4 511 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 EMCNQ9ULC0 261 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 NFU1Q9UMS0 254 aa11.32□□□□□ -0.6
UBR4-213ENST00000483922 WBP11Q9Y2W2 641 aaKnown RBP11.32□□□□□ -0.6
UBR4-213ENST00000483922 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 ZNF724A8MTY0 619 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 G3V2L1 256 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 PDPK1O15530 556 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 AKAP10O43572 662 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 TBX19O60806 448 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 RAD51DO75771 328 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 TAC1P20366 129 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 LCN1P31025 176 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 GPC1P35052 558 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 EFNA4P52798 201 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 SLC25A3Q00325 362 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 CHRNEQ04844 493 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 RUNX1T1Q06455 604 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 GABRA6Q16445 453 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 VPS26BQ4G0F5 336 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 SLC22A25Q6T423 547 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 IKBIPQ70UQ0 350 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 P2RY8Q86VZ1 359 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 FBXL14Q8N1E6 418 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 MUCL1Q96DR8 90 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 FAM120BQ96EK7 910 aaKnown RBP11.31□□□□□ -0.6
UBR4-213ENST00000483922 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 BTBD2Q9BX70 525 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 QRSL1Q9H0R6 528 aaKnown RBP11.31□□□□□ -0.6
UBR4-213ENST00000483922 KLHL9Q9P2J3 617 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 KCNE5Q9UJ90 142 aa11.31□□□□□ -0.6
UBR4-213ENST00000483922 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
UBR4-213ENST00000483922 LOC100289279A0A1B0GTE1 492 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 ZNF716A6NP11 495 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PDLIM1O00151 329 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 DNAJA2O60884 412 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 SEC22BO75396 215 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 HMGN2P05204 90 aaKnown RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 ITGA5P08648 1049 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 SNRPAP09012 282 aaKnown RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 ALOX5P09917 674 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 SDC1P18827 310 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PRPH2P23942 346 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PTAFRP25105 342 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 SERPINB4P48594 390 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 POU6F2P78424 691 aaPredicted RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 PDE7AQ13946 482 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 ARL13AQ5H913 290 aaPredicted RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 FBXW9Q5XUX1 488 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 COX18Q8N8Q8 333 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 CLHC1Q8NHS4 586 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
UBR4-213ENST00000483922 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 MS4A4EQ96PG1 132 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PLA2G12AQ9BZM1 189 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PIGUQ9H490 435 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 TUBB1Q9H4B7 451 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 PKD1L1Q8TDX9 2849 aa11.3□□□□□ -0.6
UBR4-213ENST00000483922 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 CENPVL1A0A0U1RR11 272 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 M0R1B8 84 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 NUDT14O95848 222 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 HPGDP15428 266 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 NR4A2P43354 598 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 GZMKP49863 264 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 GGTLC2Q14390 218 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 LASP1Q14847 261 aaKnown RBP11.29□□□□□ -0.6
UBR4-213ENST00000483922 QPRTQ15274 297 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 RFTN2Q52LD8 501 aaPredicted RBP11.29□□□□□ -0.6
UBR4-213ENST00000483922 FAM166AQ6J272 317 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 ZNF544Q6NX49 715 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 ZCCHC12Q6PEW1 402 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 OLIG3Q7RTU3 272 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 GALNT5Q7Z7M9 940 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 CCNYL1Q8N7R7 359 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 RFWD2Q8NHY2 731 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 MZB1Q8WU39 189 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 SORCS2Q96PQ0 1159 aa11.29□□□□□ -0.6
UBR4-213ENST00000483922 OR5B2Q96R09 309 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms