RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	HNRNPCL3	B7ZW38	293 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SHISA8	B8ZZ34	492 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159		H0YC42	278 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	EIF1AY	O14602	144 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SEC14L5	O43304	696 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	HNRNPCL1	O60812	293 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TGM6	O95932	706 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SNRPB2	P08579	225 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	UBTFL6	P0CB48	400 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	HNRNPCL4	P0DMR1	293 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	FCGR2A	P12318	317 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	NID1	P14543	1247 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	IL7R	P16871	459 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	BMP5	P22003	454 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	RPS4Y1	P22090	263 aa	Known RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLC6A8	P48029	635 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	ASCL1	P50553	236 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	RNF144A	P50876	292 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	ARFIP2	P53365	341 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TPD52	P55327	224 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	DLX5	P56178	289 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	FOXF1	Q12946	379 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	QPRT	Q15274	297 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	MAPK11	Q15759	364 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TOMM34	Q15785	309 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SGCB	Q16585	318 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	NDUFAF6	Q330K2	333 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	P4HA3	Q7Z4N8	544 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	PEX5L	Q8IYB4	626 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	DPP10	Q8N608	796 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TMCO5A	Q8N6Q1	288 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	FBXO27	Q8NI29	283 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	ADGRG7	Q96K78	797 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	NPAS1	Q99742	590 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	KLHDC3	Q9BQ90	382 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	PINK1	Q9BXM7	581 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	PIGM	Q9H3S5	423 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TIGAR	Q9NQ88	270 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	JKAMP	Q9P055	326 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	SLAMF8	Q9P0V8	285 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	LEF1	Q9UJU2	399 aa	Predicted RBP	11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	ZNF232	Q9UNY5	417 aa		11.12	□□□□□ -0.63
MRPL55-229	ENST00000483159	TRBV5-3	A0A0A0MS03	114 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	EVPLL	A8MZ36	301 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	ANGPT2	O15123	496 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	EFNA2	O43921	213 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	CYP7B1	O75881	506 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	THBS1	P07996	1170 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	GPX2	P18283	190 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	FKBP2	P26885	142 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	ADSL	P30566	484 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	EIF1AX	P47813	144 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	CCR4	P51679	360 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	FOXF2	Q12947	444 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	CTU2	Q2VPK5	515 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	DLEU7	Q6UYE1	221 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	MEX3B	Q6ZN04	569 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	MSRB3	Q8IXL7	192 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	RELL2	Q8NC24	303 aa	Predicted RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	OR10D3	Q8NH80	312 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	OR2V1	Q8NHB1	315 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	WDR60	Q8WVS4	1066 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	SMPDL3B	Q92485	455 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	INTS12	Q96CB8	462 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	KLHL15	Q96M94	604 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	QRSL1	Q9H0R6	528 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	ARMC7	Q9H6L4	198 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	RNF122	Q9H9V4	155 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	BCL2L10	Q9HD36	194 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	SERINC1	Q9NRX5	453 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	ACER3	Q9NUN7	267 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	VAPA	Q9P0L0	249 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	KLHL14	Q9P2G3	628 aa		11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	PHF3	Q92576	2039 aa	Known RBP	11.11	□□□□□ -0.63
MRPL55-229	ENST00000483159	NUP214	P35658	2090 aa	Predicted RBP	11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159		A0A0J9YW62	118 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159		A0A1W2PNV4	684 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	CYSRT1	A8MQ03	144 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	FAAH	O00519	579 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	SYNGR4	O95473	234 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	BCHE	P06276	602 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	PABPC4L	P0CB38	370 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	UQCRB	P14927	111 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	CD1E	P15812	388 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	IL11	P20809	199 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	APOBEC1	P41238	236 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	HTR3A	P46098	478 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	CARD18	P57730	90 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	SESN3	P58005	492 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	SELENBP1	Q13228	472 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	LARS2	Q15031	903 aa	Known RBP	11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	PON3	Q15166	354 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	LIN52	Q52LA3	116 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	RUNDC3A	Q59EK9	446 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	HBM	Q6B0K9	141 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	GTF2IRD2B	Q6EKJ0	949 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	CGB2	Q6NT52	195 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	GTF2IRD2	Q86UP8	949 aa		11.1	□□□□□ -0.63
MRPL55-229	ENST00000483159	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.1	□□□□□ -0.63

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