RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CIB1Q99828 191 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 ZNF559Q9BR84 538 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 ANGPTL4Q9BY76 406 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 TMEM27Q9HBJ8 222 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 PROK2Q9HC23 129 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 EXOSC3Q9NQT5 275 aaKnown RBP13.72□□□□□ -0.21
PHGDH-205ENST00000482968 ACER3Q9NUN7 267 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 MED11Q9P086 117 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 PPP4R1LQ9P1A2 415 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 ACAD8Q9UKU7 415 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 ICAM5Q9UMF0 924 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 OAZ3Q9UMX2 235 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 WIF1Q9Y5W5 379 aa13.72□□□□□ -0.21
PHGDH-205ENST00000482968 K7ENP7 123 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 TNFRSF11BO00300 401 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 CASQ2O14958 399 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-205ENST00000482968 NEURL1O76050 574 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 UQCRBP14927 111 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 IFNA8P32881 189 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 IDH2P48735 452 aaKnown RBP13.71□□□□□ -0.21
PHGDH-205ENST00000482968 P2RX1P51575 399 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 RPS6KA3P51812 740 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 MFAP5Q13361 173 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 LAPTM4AQ15012 233 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 OR1C1Q15619 314 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 TMEM81Q6P7N7 255 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 INO80CQ6PI98 192 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-205ENST00000482968 UNQ6494/PRO21346Q6UXR6 183 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 RNF217Q8TC41 542 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 EME1Q96AY2 570 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 SACM1LQ9NTJ5 587 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 MAGED1Q9Y5V3 778 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-205ENST00000482968 LYVE1Q9Y5Y7 322 aa13.71□□□□□ -0.21
PHGDH-205ENST00000482968 B4DXG7 233 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 TAF4O00268 1085 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 DPM1O60762 260 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 FMO6PO60774 539 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.22
PHGDH-205ENST00000482968 PEX2P28328 305 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 COPZ1P61923 177 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 ST3GAL3Q11203 375 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 KCNAB2Q13303 367 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 GDF7Q7Z4P5 450 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 LSRQ86X29 649 aaPredicted RBP13.71□□□□□ -0.22
PHGDH-205ENST00000482968 HS3ST5Q8IZT8 346 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 TOR1AIP2Q8NFQ8 470 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 OR5W2Q8NH69 310 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 ZNF563Q8TA94 476 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 HAS2Q92819 552 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 ZNF524Q96C55 264 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 SLC41A3Q96GZ6 507 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 JSRP1Q96MG2 331 aaPredicted RBP13.71□□□□□ -0.22
PHGDH-205ENST00000482968 TRIM2Q9C040 744 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 DSN1Q9H410 356 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 TIMMDC1Q9NPL8 285 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 HRH3Q9Y5N1 445 aa13.71□□□□□ -0.22
PHGDH-205ENST00000482968 TRAPPC13A5PLN9 417 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 OR5H15A6NDH6 313 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 G3V2T6 193 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 GNB5O14775 395 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 CDC40O60508 579 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHGDH-205ENST00000482968 SLC25A12O75746 678 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 CEACAM4O75871 244 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 THY1P04216 161 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 PRKACGP22612 351 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 DNAJA1P31689 397 aaKnown RBP13.7□□□□□ -0.22
PHGDH-205ENST00000482968 SLC6A8P48029 635 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 MASP1P48740 699 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 ARHGDIAP52565 204 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 HMGA2P52926 109 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 GPR85P60893 370 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 ARG2P78540 354 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 CBFBQ13951 182 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 TOMM34Q15785 309 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-205ENST00000482968 FGD3Q5JSP0 725 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 ZDHHC13Q8IUH4 622 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 LSMEM1Q8N8F7 131 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 WDSUB1Q8N9V3 476 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 PIK3C3Q8NEB9 887 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 OR5K1Q8NHB7 308 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 FRMD6Q96NE9 622 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 EPYCQ99645 322 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
PHGDH-205ENST00000482968 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHGDH-205ENST00000482968 RPS6KB2Q9UBS0 482 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 SLC7A7Q9UM01 511 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 NCOR2Q9Y618 2525 aa13.7□□□□□ -0.22
PHGDH-205ENST00000482968 A0A1B0GWA3 101 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 SNX4O95219 450 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 OR5F1O95221 314 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 PGCP20142 388 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 HSPA13P48723 471 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 SMIM11AP58511 58 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 EXOC3L2Q2M3D2 409 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 OTUD3Q5T2D3 398 aaPredicted RBP13.69□□□□□ -0.22
PHGDH-205ENST00000482968 ZNF613Q6PF04 617 aa13.69□□□□□ -0.22
PHGDH-205ENST00000482968 TBPL2Q6SJ96 375 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms