RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 LINC00471Q8N535 108 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 BVESQ8NE79 360 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 OR4D9Q8NGE8 314 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 DMRTA2Q96SC8 542 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 NPAS1Q99742 590 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 FAIM2Q9BWQ8 316 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 PIPOXQ9P0Z9 390 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 NFKBIL1Q9UBC1 381 aaPredicted RBP13.29□□□□□ -0.28
COL9A2-207ENST00000482722 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
COL9A2-207ENST00000482722 DMDP11532 3685 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 CACNB4O00305 520 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 TMPRSS11DO60235 418 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ERAL1O75616 437 aaKnown RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 GATBO75879 557 aaKnown RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 CHRM4P08173 479 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 FGF2P09038 288 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 RAB3AP20336 220 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 F8A1P23610 371 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 VEGFCP49767 419 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SHC2P98077 582 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 KLF9Q13886 244 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 LASP1Q14847 261 aaKnown RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ZNF750Q32MQ0 723 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ZNF658BQ4V348 819 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 RRM2BQ7LG56 351 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 CMIPQ8IY22 773 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 GSDMCQ9BYG8 508 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 PLA2G2FQ9BZM2 168 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ACTR6Q9GZN1 396 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SLC6A15Q9H2J7 730 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 AUNIPQ9H7T9 357 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 CA10Q9NS85 328 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 MGAT4CQ9UBM8 478 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ZMAT5Q9UDW3 170 aaKnown RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 GPR55Q9Y2T6 319 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 CXorf51AA0A1B0GTR3 108 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SURF4O15260 269 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SIGLEC5O15389 551 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 GMDSO60547 372 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 UBL3O95164 117 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 PCCBP05166 539 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 C4BPBP20851 252 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 ACADLP28330 430 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 RNF144AP50876 292 aaPredicted RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 MMP15P51511 669 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 STXBP1P61764 594 aaKnown RBP13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SIGLEC14Q08ET2 396 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 UBE2Q1Q7Z7E8 422 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 FAM129CQ86XR2 697 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 NRSN1Q8IZ57 195 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 OR11G2Q8NGC1 345 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 SLC35G5Q96KT7 338 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 PRRC1Q96M27 445 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 OR10A4Q9H209 315 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 MED20Q9H944 212 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 BABAM2Q9NXR7 383 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 PRELID3BQ9Y3B1 194 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 KCNE3Q9Y6H6 103 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 TRIOBPQ9H2D6 2365 aa13.28□□□□□ -0.28
COL9A2-207ENST00000482722 A0A1W2PPK0 400 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 LRRN3E7EW58 273 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.28
COL9A2-207ENST00000482722 AHRP35869 848 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 CEACAM19Q7Z692 300 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 GNPDA2Q8TDQ7 276 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 TIMP4Q99727 224 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 AIF1LQ9BQI0 150 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 SEC22CQ9BRL7 303 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 PELOQ9BRX2 385 aaKnown RBP13.27□□□□□ -0.28
COL9A2-207ENST00000482722 DPH7Q9BTV6 452 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 LRRN3Q9H3W5 708 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 XKR8Q9H6D3 395 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 WDR26Q9H7D7 661 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 SCPEP1Q9HB40 452 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 EQTNQ9NQ60 294 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 GPR160Q9UJ42 338 aa13.27□□□□□ -0.28
COL9A2-207ENST00000482722 ZNF98A6NK75 572 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 ANXA2P2A6NMY6 339 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 DNASE2O00115 360 aaPredicted RBP13.27□□□□□ -0.29
COL9A2-207ENST00000482722 KCNJ13O60928 360 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 APOC3P02656 99 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 PRNPP04156 253 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 NFYAP23511 347 aaPredicted RBP13.27□□□□□ -0.29
COL9A2-207ENST00000482722 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 HTR1FP30939 366 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 BSGP35613 385 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 DHODHQ02127 395 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 RIPPLY1Q0D2K3 151 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 SLC22A10Q63ZE4 541 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 SYT9Q86SS6 491 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 LRRTM4Q86VH4 590 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 AMZ2Q86W34 360 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 SLITRK4Q8IW52 837 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 OR2L2Q8NH16 312 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 C16orf58Q96GQ5 468 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 USB1Q9BQ65 265 aaKnown RBP13.27□□□□□ -0.29
COL9A2-207ENST00000482722 KXD1Q9BQD3 176 aa13.27□□□□□ -0.29
COL9A2-207ENST00000482722 ORAI3Q9BRQ5 295 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms