RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 C11orf16Q9NQ32 467 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 BAIAP2Q9UQB8 552 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 PCDHGB6Q9Y5F9 930 aa10.11□□□□□ -0.79
VTI1A-204ENST00000480057 ASCC3Q8N3C0 2202 aaKnown RBP10.11□□□□□ -0.79
VTI1A-204ENST00000480057 A0A087WUJ7 227 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 IRGMA1A4Y4 181 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 SNTNA6NMZ2 147 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 M0R3G1 203 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 GTPBP1O00178 669 aaKnown RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 PIP5K1CO60331 668 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 FADS1O60427 444 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 HCN1O60741 890 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 ADAM11O75078 769 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 ICOSLGO75144 302 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 HMGN1P05114 100 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 CDK1P06493 297 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RAB40ALP0C0E4 278 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 IFI30P13284 250 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 GRK5P34947 590 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 SLC15A1P46059 708 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 SLC9A3P48764 834 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TMED10P49755 219 aaKnown RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 FOXD4Q12950 439 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 PMS2P3Q13401 168 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RAB39AQ14964 217 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 CD226Q15762 336 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TBCEQ15813 527 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 SMN1Q16637 294 aaKnown RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 CNPY1Q3B7I2 92 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RNLSQ5VYX0 342 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 GTF2IRD2BQ6EKJ0 949 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 FAAH2Q6GMR7 532 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 KIRREL2Q6UWL6 708 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RAB11FIP2Q7L804 512 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 GLRX5Q86SX6 157 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 GTF2IRD2Q86UP8 949 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 OR2T33Q8NG76 320 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 OR52L1Q8NGH7 329 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 OR2Y1Q8NGV0 311 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TMEM163Q8TC26 289 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 PHOSPHO1Q8TCT1 267 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RNF138Q8WVD3 245 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TTC9Q92623 222 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 NACC2Q96BF6 587 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 BPIFA2Q96DR5 249 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 DEPDC7Q96QD5 511 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 BCL7BQ9BQE9 202 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TMEM43Q9BTV4 400 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TBL1XR1Q9BZK7 514 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 TBC1D23Q9NUY8 699 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 CNIH4Q9P003 139 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RSL24D1Q9UHA3 163 aaKnown RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RPL36Q9Y3U8 105 aaKnown RBP10.1□□□□□ -0.79
VTI1A-204ENST00000480057 NPFFR2Q9Y5X5 522 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 COMMD3-BMI1R4GMX3 469 aa10.1□□□□□ -0.79
VTI1A-204ENST00000480057 RALGAPA1Q6GYQ0 2036 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 IGHV3-20A0A0C4DH32 117 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TRBV11-1A0A0K0K1C0 115 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 FAM86C2PA6NEL3 165 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 ZNF99A8MXY4 864 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 EFCAB9A8MZ26 197 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 H3BSA7 217 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TNFRSF10AO00220 468 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 NDUFB5O43674 189 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 NADKO95544 446 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 DLGAP3O95886 979 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 MT-ND2P03891 347 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 IGFBP1P08833 259 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 BMP7P18075 431 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 DCKP27707 260 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 FOLR3P41439 243 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 GPR4P46093 362 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TMBIM6P55061 237 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 SUMO3P55854 103 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 EMX1Q04741 257 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PCOLCEQ15113 449 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 NEDD8Q15843 81 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PGGHGQ32M88 737 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 ANKDD1AQ495B1 522 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 SYT6Q5T7P8 510 aaPredicted RBP10.09□□□□□ -0.79
VTI1A-204ENST00000480057 UBE2UQ5VVX9 321 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 ACSM5Q6NUN0 579 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 APOOLQ6UXV4 268 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 AHSA2Q719I0 299 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PRR22Q8IZ63 422 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CACTIN-AS1Q8N1I8 211 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 CADM2Q8N3J6 435 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 TCEANCQ8N8B7 351 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 OR8D4Q8NGM9 314 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 PFN4Q8NHR9 129 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 M1APQ8TC57 530 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 FANK1Q8TC84 345 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 SLC22A8Q8TCC7 542 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 ELP5Q8TE02 316 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 GRHL3Q8TE85 626 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 FAR1Q8WVX9 515 aa10.09□□□□□ -0.79
VTI1A-204ENST00000480057 LIPHQ8WWY8 451 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms