RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 CUL3Q13618 768 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 E2F2Q14209 437 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 MLC1Q15049 377 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 RNPS1Q15287 305 aaKnown RBP9.81□□□□□ -0.84
CCDC18-208ENST00000479653 SH2D4BQ5SQS7 431 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF678Q5SXM1 525 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 TTC19Q6DKK2 380 aaPredicted RBP9.81□□□□□ -0.84
CCDC18-208ENST00000479653 Q6ZT83 130 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 ESPNLQ6ZVH7 1005 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 SSX8Q7RTT4 187 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 LRRC70Q7Z2Q7 622 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 CPLX4Q7Z7G2 160 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 P2RY8Q86VZ1 359 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 OR6Y1Q8NGX8 325 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 OR52N5Q8NH56 324 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 HPS1Q92902 700 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 GATA5Q9BWX5 397 aaPredicted RBP9.81□□□□□ -0.84
CCDC18-208ENST00000479653 MYOZ1Q9NP98 299 aaPredicted RBP9.81□□□□□ -0.84
CCDC18-208ENST00000479653 FLRT3Q9NZU0 649 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 OPTCQ9UBM4 332 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 PRSS50Q9UI38 385 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 ANGPTL3Q9Y5C1 460 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 PCDHGA11Q9Y5H2 935 aa9.81□□□□□ -0.84
CCDC18-208ENST00000479653 WNK1Q9H4A3 2382 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 GOLGA8QA0A0J9YX86 632 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 A0A1W2PR80 420 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 GOLGA8OA6NCC3 632 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 OR5H1A6NKK0 313 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 GOLGA8NF8WBI6 632 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 K7EPI3 171 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 FADS1O60427 444 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 EDF1O60869 148 aaKnown RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 SNNO75324 88 aaPredicted RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 BCAS2O75934 225 aaPredicted RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 PRKD3O94806 890 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 TGDSO95455 350 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 CLDN9O95484 217 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 RPS17P08708 135 aaKnown RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 ME2P23368 584 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 ZFP36P26651 326 aaKnown RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 RAC1P63000 192 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 BST1Q10588 318 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 FOXL1Q12952 345 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 LCP2Q13094 533 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 CCNIQ14094 377 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 TMEM44Q2T9K0 475 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 CCNYL2Q5T2Q4 361 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 SLC48A1Q6P1K1 146 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 NPSR1Q6W5P4 371 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 FRMD7Q6ZUT3 714 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 USP43Q70EL4 1123 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 FAM110BQ8TC76 370 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 RNF128Q8TEB7 428 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 KLHL29Q96CT2 875 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF317Q96PQ6 595 aaPredicted RBP9.8□□□□□ -0.84
CCDC18-208ENST00000479653 TMEM237Q96Q45 408 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 SIKE1Q9BRV8 207 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 PFDN4Q9NQP4 134 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 PSME2Q9UL46 239 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 USP22Q9UPT9 525 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 RAP2CQ9Y3L5 183 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF780BQ9Y6R6 833 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 EXPH5Q8NEV8 1989 aa9.8□□□□□ -0.84
CCDC18-208ENST00000479653 C9JVG2 144 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 RAD51DO75771 328 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 STAMBPO95630 424 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 FAM107AO95990 144 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 OTCP00480 354 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ARAFP10398 606 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF17P17021 662 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 IGHV1-2P23083 117 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 RFX3P48380 749 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ARFIP2P53365 341 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 PKNOX1P55347 436 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 SNRPD2P62316 118 aaKnown RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 PSPHP78330 225 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 PHC1P78364 1004 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 CLCQ05315 142 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 GABPB1Q06547 395 aaPredicted RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 C17orf67Q0P5P2 114 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF239Q16600 458 aaKnown RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 CPSF6Q16630 551 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZSWIM7Q19AV6 140 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 MST1LQ2TV78 715 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ARL13AQ5H913 290 aaPredicted RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 UGT2A3Q6UWM9 527 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZCCHC23Q6ZST2 131 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 SLC46A3Q7Z3Q1 461 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 GLCCI1Q86VQ1 547 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 LILRA2Q8N149 483 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 TEX9Q8N6V9 391 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 CDYL2Q8N8U2 506 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF483Q8TF39 744 aaPredicted RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 SLC9A6Q92581 669 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 ZNF775Q96BV0 537 aaPredicted RBP9.79□□□□□ -0.84
CCDC18-208ENST00000479653 NPAS1Q99742 590 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 TBL1XR1Q9BZK7 514 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
CCDC18-208ENST00000479653 TIGARQ9NQ88 270 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 256.2 ms