RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 REEP3Q6NUK4 255 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 MTDHQ86UE4 582 aaKnown RBP18.49■□□□□ 0.55
VARS-224ENST00000479051 ZNF440Q8IYI8 595 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 NFKBIDQ8NI38 313 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 ZNF563Q8TA94 476 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 ST8SIA1Q92185 356 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 SPATA5L1Q9BVQ7 753 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 IKZF5Q9H5V7 419 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 RNF6Q9Y252 685 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 ANGPT4Q9Y264 503 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 NCOA6Q14686 2063 aaPredicted RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 GJE1A6NN92 205 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 CLCA1A8K7I4 914 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 PGM3O95394 542 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 ETS2P15036 469 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 PRKCAP17252 672 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 RBBP4Q09028 425 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 SCARB2Q14108 478 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 CAPRIN1Q14444 709 aaKnown RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 PDSS1Q5T2R2 415 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 MRPL2Q5T653 305 aaKnown RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 GRAMD2AQ8IUY3 354 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 C11orf65Q8NCR3 313 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 FBXO27Q8NI29 283 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 LRRC58Q96CX6 371 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 TM9SF2Q99805 663 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 PLEKHB1Q9UF11 243 aaPredicted RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 ZNF443Q9Y2A4 671 aaPredicted RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 KLF2Q9Y5W3 355 aaPredicted RBP18.48■□□□□ 0.55
VARS-224ENST00000479051 MED12Q93074 2177 aa18.48■□□□□ 0.55
VARS-224ENST00000479051 CLDN24A6NM45 220 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 DNAJA2O60884 412 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 PSMA4P25789 261 aaKnown RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 RYKP34925 604 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 TOMM34Q15785 309 aaPredicted RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 SGCBQ16585 318 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 SLC25A53Q5H9E4 307 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 RNF220Q5VTB9 566 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 ESPNLQ6ZVH7 1005 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 P4HA3Q7Z4N8 544 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 VRK2Q86Y07 508 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 CCDC71Q8IV32 467 aaPredicted RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 SLC30A8Q8IWU4 369 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 HIPK4Q8NE63 616 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 OR8J3Q8NGG0 315 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 POC1BQ8TC44 478 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 CNOT9Q92600 299 aaKnown RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 WNT2BQ93097 391 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 ZFP3Q96NJ6 502 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 UCN2Q96RP3 112 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 ZNF607Q96SK3 696 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 KLHDC3Q9BQ90 382 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 CCDC106Q9BWC9 280 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 SPATA9Q9BWV2 254 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 SERINC1Q9NRX5 453 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 ACER3Q9NUN7 267 aa18.47■□□□□ 0.55
VARS-224ENST00000479051 PAQR5Q9NXK6 330 aaPredicted RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 DNAJB12Q9NXW2 375 aaKnown RBP18.47■□□□□ 0.55
VARS-224ENST00000479051 A0A0G2JNJ9 132 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 CDHR4A6H8M9 788 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 MBD3L4A6NDZ8 208 aaPredicted RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 MBD3L3A6NE82 208 aaPredicted RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 MBD3L5A6NJ08 208 aaPredicted RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 ETV2O00321 342 aaPredicted RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 EIF1AYO14602 144 aaKnown RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 CLDN1O95832 211 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 COX4I1P13073 169 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 GP1BBP13224 206 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 SELENBP1Q13228 472 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 ZNF311Q5JNZ3 666 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 NANOGP8Q6NSW7 305 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 ZNF836Q6ZNA1 936 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 SERPINA11Q86U17 422 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 LILRA2Q8N149 483 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 MBD3L2Q8NHZ7 208 aaPredicted RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 KAT8Q9H7Z6 458 aaKnown RBP18.46■□□□□ 0.55
VARS-224ENST00000479051 NANOGQ9H9S0 305 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 Q9UFV3 132 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 PRDM4Q9UKN5 801 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 ARL2BPQ9Y2Y0 163 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 PCNX1Q96RV3 2341 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 ARHGAP21Q5T5U3 1957 aa18.46■□□□□ 0.55
VARS-224ENST00000479051 SPTBN1Q01082 2364 aaKnown RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 PRORSD1PA6NEY8 169 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 CFAP73A6NFT4 308 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SLC22A20A6NK97 555 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 PRSS44E7EML9 344 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 BCAS1O75363 584 aaPredicted RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 SERPINB7O75635 380 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 NTN1O95631 604 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 PABPC4LP0CB38 370 aaKnown RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 CEACAM8P31997 349 aaPredicted RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 EIF1AXP47813 144 aaKnown RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 SUCLG1P53597 346 aaKnown RBP18.45■□□□□ 0.54
VARS-224ENST00000479051 CLDN20P56880 219 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SESN3P58005 492 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 MERTKQ12866 999 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SELPLGQ14242 412 aa18.45■□□□□ 0.54
VARS-224ENST00000479051 SEM1Q6ZVN7 128 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms