RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 PGDP52209 483 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 SF3A2Q15428 464 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ZNF791Q3KP31 576 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 ATCAYQ86WG3 371 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 CNPPD1Q9BV87 410 aa11.09□□□□□ -0.63
PRPF39-203ENST00000477626 PNO1Q9NRX1 252 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 FAM32AQ9Y421 112 aaKnown RBP11.09□□□□□ -0.63
PRPF39-203ENST00000477626 H3BMQ9 156 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 UQCRC1P31930 480 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 RGS8P57771 180 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 TAS2R41P59536 307 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 AQP6Q13520 282 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 FAM69BQ5VUD6 431 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 LNX2Q8N448 690 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 TMEM239Q8WW34 195 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 COG8Q96MW5 612 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ZNF582Q96NG8 517 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 TMEM43Q9BTV4 400 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 CHRNA9Q9UGM1 479 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ENOPH1Q9UHY7 261 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 EXOGQ9Y2C4 368 aaKnown RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 HS3ST3B1Q9Y662 390 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 TM4SF5O14894 197 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ENTPD6O75354 484 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 SEC24DO94855 1032 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 INMTO95050 263 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ASAH2BP0C7U1 165 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 SLC26A5P58743 744 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 Q0VFX4 171 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 CPEB2Q7Z5Q1 589 aaKnown RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ADAMTS17Q8TE56 1095 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 SLC19A3Q9BZV2 496 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 ATP13A2Q9NQ11 1180 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 KIF17Q9P2E2 1029 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 IGHV3-20A0A0C4DH32 117 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 SOX14O95416 240 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 MT-ND2P03891 347 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 FBXO45P0C2W1 286 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 FOXK2Q01167 660 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 FAM122BQ7Z309 247 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 RANBP3LQ86VV4 465 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 TMEM163Q8TC26 289 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 DAZLQ92904 295 aaKnown RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 GPN2Q9H9Y4 310 aaPredicted RBP11.08□□□□□ -0.64
PRPF39-203ENST00000477626 SELENONQ9NZV5 590 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 PCDHGA1Q9Y5H4 931 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 CDH10Q9Y6N8 788 aa11.08□□□□□ -0.64
PRPF39-203ENST00000477626 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 IGHA1P01876 353 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 INHBBP09529 407 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 RAB40ALP0C0E4 278 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 DBTP11182 482 aaKnown RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NNATQ16517 81 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 TMEM44Q2T9K0 475 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ANKRD13BQ86YJ7 626 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 AGBL5Q8NDL9 886 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 FAM81AQ8TBF8 368 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 GRHL3Q8TE85 626 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 PHOX2BQ99453 314 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NPAS1Q99742 590 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 GTPBP2Q9BX10 602 aaKnown RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NMNAT2Q9BZQ4 307 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NRSN2Q9GZP1 204 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 FGF20Q9NP95 211 aaPredicted RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 CTPS2Q9NRF8 586 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 MED17Q9NVC6 651 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 CFL2Q9Y281 166 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 OR10H3O60404 316 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 MPZL2O60487 215 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 GABARAPO95166 117 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ATE1O95260 518 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 CCNYL3P0C7X3 344 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 C21orf33P30042 268 aaPredicted RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 PCYT1AP49585 367 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 HPCAP84074 193 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 CHAF1BQ13112 559 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 LSAMPQ13449 338 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NCF4Q15080 339 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ISXQ2M1V0 245 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 FGD3Q5JSP0 725 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 BCDIN3DQ7Z5W3 292 aaKnown RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ZNF227Q86WZ6 799 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 SLC43A2Q8N370 569 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 OMA1Q96E52 524 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 MPP4Q96JB8 637 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ART5Q96L15 291 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 NODALQ96S42 347 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
PRPF39-203ENST00000477626 TNRC6AQ8NDV7 1962 aaKnown RBP11.07□□□□□ -0.64
PRPF39-203ENST00000477626 LRP3O75074 770 aa11.06□□□□□ -0.64
PRPF39-203ENST00000477626 NAGAP17050 411 aa11.06□□□□□ -0.64
PRPF39-203ENST00000477626 ZNHIT3Q15649 155 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms