RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ETS2P15036 469 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CD247P20963 164 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DCKP27707 260 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 POLR2IP36954 125 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 LIMS1P48059 325 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 KCNJ5P48544 419 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CRISP3P54108 245 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 FBXW4P57775 412 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 TEKQ02763 1124 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 PMS2P3Q13401 168 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 RAB39AQ14964 217 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 OR1C1Q15619 314 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 NTRK2Q16620 822 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CTU2Q2VPK5 515 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 FIGNL1Q6PIW4 674 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 GPALPP1Q8IXQ4 340 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 SPARTQ8N0X7 666 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CYP4Z2PQ8N1L4 340 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 OR5M3Q8NGP4 307 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DIO2Q92813 273 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 EFHD2Q96C19 240 aaPredicted RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 MPP4Q96JB8 637 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 ADOQ96SZ5 270 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DOK1Q99704 481 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 ACER3Q9NUN7 267 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 FBXO34Q9NWN3 711 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 SH3GLB1Q9Y371 365 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 EML6Q6ZMW3 1958 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 A0A0G2JPF8 293 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 HNRNPCL2B2RXH8 293 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 HNRNPCL3B7ZW38 293 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 NOL3O60936 208 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 GADD45GO95257 159 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 AGR2O95994 175 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 HNRNPCL4P0DMR1 293 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 NR2F1P10589 423 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 IL7RP16871 459 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 KRT20P35900 424 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 YAP1P46937 504 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 OR1E2P47887 323 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 RFX3P48380 749 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 TMED10P49755 219 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 TNFSF10P50591 281 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CDH12P55289 794 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 RPP38P78345 283 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 LY6DQ14210 128 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 LAPTM4AQ15012 233 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DCST2Q5T1A1 773 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CCNJQ5T5M9 372 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 MDGA2Q7Z553 956 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 DND1Q8IYX4 353 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 SMYD1Q8NB12 490 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 IPCEF1Q8WWN9 437 aaPredicted RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 NODALQ96S42 347 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 FEVQ99581 238 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 CALML5Q9NZT1 146 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 MRTO4Q9UKD2 239 aaKnown RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 LHX6Q9UPM6 363 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 LIPT1Q9Y234 373 aa15.45■□□□□ 0.06
EPHB4-204ENST00000477446 GPC6Q9Y625 555 aaPredicted RBP15.45■□□□□ 0.06
EPHB4-204ENST00000477446 PRAMEF27A3QJZ7 478 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 OR6C70A6NIJ9 312 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 SEC14L2O76054 403 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 CCNB2O95067 398 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 OXSR1O95747 527 aaPredicted RBP15.44■□□□□ 0.06
EPHB4-204ENST00000477446 IL33O95760 270 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 IL12BP29460 328 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 PNLIPRP2P54317 469 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 TMBIM6P55061 237 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 MAD2L1BPQ15013 274 aaPredicted RBP15.44■□□□□ 0.06
EPHB4-204ENST00000477446 DUSP7Q16829 419 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 COLEC12Q5KU26 742 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 ATAD3BQ5T9A4 648 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 LAIR2Q6ISS4 152 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 HEPHL1Q6MZM0 1159 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 RTL4Q6ZR62 310 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 DEPDC4Q8N2C3 294 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 PARP8Q8N3A8 854 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 RBMXL3Q8N7X1 1067 aaKnown RBP15.44■□□□□ 0.06
EPHB4-204ENST00000477446 MDS2Q8NDY4 140 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 OR10G3Q8NGC4 313 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 OR13F1Q8NGS4 319 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 PHF10Q8WUB8 498 aaKnown RBP15.44■□□□□ 0.06
EPHB4-204ENST00000477446 ISOC1Q96CN7 298 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 WBP1Q96G27 269 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 SGCZQ96LD1 299 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 COL21A1Q96P44 957 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 SDF2Q99470 211 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 DUSP21Q9H596 190 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 TIMMDC1Q9NPL8 285 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 SEC14L3Q9UDX4 400 aa15.44■□□□□ 0.06
EPHB4-204ENST00000477446 BOD1L1Q8NFC6 3051 aa15.43■□□□□ 0.06
EPHB4-204ENST00000477446 PRAMEF25A6NGN4 478 aa15.43■□□□□ 0.06
EPHB4-204ENST00000477446 SFTPCP11686 197 aa15.43■□□□□ 0.06
EPHB4-204ENST00000477446 PSMD4P55036 377 aaKnown RBP15.43■□□□□ 0.06
EPHB4-204ENST00000477446 FUT5Q11128 374 aa15.43■□□□□ 0.06
EPHB4-204ENST00000477446 MAPK11Q15759 364 aa15.43■□□□□ 0.06
EPHB4-204ENST00000477446 EXOC3L2Q2M3D2 409 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms