RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	KRT6C	P48668	564 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	RIPK1	Q13546	671 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	ELAVL3	Q14576	367 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	NDUFA9	Q16795	377 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	C2orf83	Q53S99	150 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	CFAP157	Q5JU67	520 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	APTX	Q7Z2E3	356 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF589	Q86UQ0	364 aa	Predicted RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	ERI1	Q8IV48	349 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	OR10T2	Q8NGX3	314 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	ANKRD49	Q8WVL7	239 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	SHC3	Q92529	594 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	MS4A14	Q96JA4	679 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	PLEKHF1	Q96S99	279 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF221	Q9UK13	617 aa		2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	DDX49	Q9Y6V7	483 aa	Known RBP	2.93	□□□□□ -1.94
RBM39-231	ENST00000477334	PPIAL4C	A0A0B4J2A2	164 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CCDC169	A6NNP5	214 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334		B4DXG7	233 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	UBXN8	O00124	270 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	MAGEB3	O15480	346 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	EMC8	O43402	210 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	MTX2	O75431	263 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	RHOBTB1	O94844	696 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	MFN2	O95140	757 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	PPIAL4G	P0DN37	164 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	SULT1E1	P49888	294 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	EFNA3	P52797	238 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	GBX2	P52951	348 aa	Predicted RBP	2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	ACTR1A	P61163	376 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF45	Q02386	682 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	LAGE3	Q14657	143 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	HERPUD1	Q15011	391 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CCDC57	Q2TAC2	916 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	KRTAP13-3	Q3SY46	172 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	TIGIT	Q495A1	244 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	USH1G	Q495M9	461 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	NADK2	Q4G0N4	442 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	TMEM41B	Q5BJD5	291 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	SULT1C3	Q6IMI6	304 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CENPL	Q8N0S6	344 aa	Predicted RBP	2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	BBS1	Q8NFJ9	593 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	SETD7	Q8WTS6	366 aa	Known RBP	2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF414	Q96IQ9	312 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	C4orf36	Q96KX1	117 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	IMMP1L	Q96LU5	166 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CITED1	Q99966	193 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	NICN1	Q9BSH3	213 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	DUSP16	Q9BY84	665 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CHIA	Q9BZP6	476 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	ASB8	Q9H765	288 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	CTNNA3	Q9UI47	895 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	UBQLN1	Q9UMX0	589 aa	Known RBP	2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	MRPS7	Q9Y2R9	242 aa	Known RBP	2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	WDR45	Q9Y484	360 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	OARD1	Q9Y530	152 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	KIF16B	Q96L93	1317 aa		2.92	□□□□□ -1.94
RBM39-231	ENST00000477334	IGHV1OR15-1	A0A075B7D0	117 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	C15orf38-AP3S2	A0A0A6YYH1	394 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF705E	A8MWA4	302 aa	Predicted RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CLDN5	O00501	218 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CTAGE5	O15320	804 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	TIMP1	P01033	207 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	FUT3	P21217	361 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	ATP6V1C1	P21283	382 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	HNRNPA2B1	P22626	353 aa	Known RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CALB2	P22676	271 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	PSMA2	P25787	234 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	NTS	P30990	170 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	KIR2DS2	P43631	304 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	GNB2	P62879	340 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	EWSR1	Q01844	656 aa	Known RBP eCLIP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	EGFEM1P	Q0D2K5	195 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CUL1	Q13616	776 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	SLC5A12	Q1EHB4	618 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	MAJIN	Q3KP22	176 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	RABL6	Q3YEC7	729 aa	Predicted RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CCDC183	Q5T5S1	534 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	ATF7IP2	Q5U623	682 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	FAHD2B	Q6P2I3	314 aa	Predicted RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	DNM1P46	Q6ZS02	220 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	KIAA1328	Q86T90	577 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	PPP1R27	Q86WC6	154 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	C17orf82	Q86X59	251 aa	Predicted RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	GRAMD2A	Q8IUY3	354 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	SKA3	Q8IX90	412 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	ZNF100	Q8IYN0	542 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	ALLC	Q8N6M5	410 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	AEN	Q8WTP8	325 aa	Known RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	MYLPF	Q96A32	169 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	FAHD2A	Q96GK7	314 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CELF6	Q96J87	481 aa	Known RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	SMIM14	Q96QK8	99 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	GPA33	Q99795	319 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	CCT7	Q99832	543 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	RMND5A	Q9H871	391 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	LRRC40	Q9H9A6	602 aa		2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	WRAP73	Q9P2S5	460 aa	Predicted RBP	2.91	□□□□□ -1.94
RBM39-231	ENST00000477334	IGHV7-81	A0A0B4J1V7	117 aa		2.9	□□□□□ -1.95

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