RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 PEX5LQ8IYB4 626 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 SLC43A2Q8N370 569 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 FBXO27Q8NI29 283 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 ZNF563Q8TA94 476 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 ZFP90Q8TF47 636 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 SLC25A43Q8WUT9 341 aaPredicted RBP9.18□□□□□ -0.94
CCM2-208ENST00000476594 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 TRNT1Q96Q11 434 aaKnown RBP9.18□□□□□ -0.94
CCM2-208ENST00000476594 CCDC28BQ9BUN5 200 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 CLEC4MQ9H2X3 399 aaPredicted RBP9.18□□□□□ -0.94
CCM2-208ENST00000476594 SDR39U1Q9NRG7 319 aaPredicted RBP9.18□□□□□ -0.94
CCM2-208ENST00000476594 ZNF226Q9NYT6 803 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 P2RX2Q9UBL9 471 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 PRDM4Q9UKN5 801 aa9.18□□□□□ -0.94
CCM2-208ENST00000476594 ANKRD17O75179 2603 aaKnown RBP9.18□□□□□ -0.94
CCM2-208ENST00000476594 FAM234BA2RU67 622 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SH3D21A4FU49 640 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SHISA8B8ZZ34 492 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 H0YC42 278 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 ZNF195O14628 629 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TNFSF11O14788 317 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 CXCL13O43927 109 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SS18L1O75177 396 aaPredicted RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 CTAG2O75638 210 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 UGT2B17O75795 530 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 UBTFL6P0CB48 400 aaPredicted RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 ZCCHC18P0CG32 403 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 IL7RP16871 459 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 PRKCAP17252 672 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SFTPDP35247 375 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 CD79BP40259 229 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 HTR3AP46098 478 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 CRISP3P54108 245 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TPD52P55327 224 aaPredicted RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 CSNK2A1P68400 391 aaPredicted RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 PHC1P78364 1004 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SKP2Q13309 424 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 DAZAP2Q15038 168 aaPredicted RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 QPRTQ15274 297 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SLC25A53Q5H9E4 307 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TMEM201Q5SNT2 666 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCM2-208ENST00000476594 TYW3Q6IPR3 259 aaKnown RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 CBLN3Q6UW01 205 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 EPGNQ6UW88 154 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 BEND4Q6ZU67 534 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 RNF130Q86XS8 419 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 ZNF440Q8IYI8 595 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 ARFGAP2Q8N6H7 521 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 GPR119Q8TDV5 335 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 OSTF1Q92882 214 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 RAB8BQ92930 207 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 NINJ1Q92982 152 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 ZHX1-C8orf76Q96EF9 292 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TEX37Q96LM6 180 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SIKE1Q9BRV8 207 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 MED18Q9BUE0 208 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 THUMPD3Q9BV44 507 aaKnown RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 SAP130Q9H0E3 1048 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 SERHL2Q9H4I8 314 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 RABEP2Q9H5N1 569 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TMEM185BQ9H7F4 350 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 GP6Q9HCN6 339 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 EXOSC3Q9NQT5 275 aaKnown RBP9.17□□□□□ -0.94
CCM2-208ENST00000476594 RASSF1Q9NS23 344 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TMEM45AQ9NWC5 275 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 ITGB1BP2Q9UKP3 347 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 TRIM33Q9UPN9 1127 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
CCM2-208ENST00000476594 C16orf97H3BN30 126 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 ETV2O00321 342 aaPredicted RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 HMGN4O00479 90 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 FCMRO60667 390 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 H6PDO95479 791 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 DBIP07108 87 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 CD1EP15812 388 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 PPP3CBP16298 524 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 PPIBP23284 216 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 PSMA4P25789 261 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 IL12AP29459 219 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 APOBEC1P41238 236 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 CRATP43155 626 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 MRPL19P49406 292 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 MAP2K6P52564 334 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 CASP9P55211 416 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 RAC3P60763 192 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 KCNJ10P78508 379 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 MERTKQ12866 999 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 ZNF239Q16600 458 aaKnown RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 TMEM176BQ3YBM2 270 aaPredicted RBP9.16□□□□□ -0.94
CCM2-208ENST00000476594 TIGD2Q4W5G0 525 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 LIN52Q52LA3 116 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 TTMPQ5BVD1 217 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 AP1ARQ63HQ0 302 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 VWA1Q6PCB0 445 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 FRRS1Q6ZNA5 592 aa9.16□□□□□ -0.94
CCM2-208ENST00000476594 POC1BQ8TC44 478 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms