RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 AKAP8O43823 692 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 IGLV3-19P01714 112 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 RFX2P48378 723 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 RPS7P62081 194 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 GAS6Q14393 721 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF267Q14586 743 aaPredicted RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 GLYR1Q49A26 553 aaPredicted RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF362Q5T0B9 420 aaPredicted RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 PRPF38BQ5VTL8 546 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 CADM2Q8N3J6 435 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 RCBTB1Q8NDN9 531 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TNFRSF13CQ96RJ3 184 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TMEM27Q9HBJ8 222 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 MALT1Q9UDY8 824 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 GSTK1Q9Y2Q3 226 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 CLDN16Q9Y5I7 305 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 LRRN3E7EW58 273 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 FMO6PO60774 539 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 AK1P00568 194 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 FGF9P31371 208 aaPredicted RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 GFERP55789 205 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TMEM44Q2T9K0 475 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TMEM91Q6ZNR0 172 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TMPRSS11FQ6ZWK6 438 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 UTS2BQ765I0 119 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 IL17RDQ8NFM7 739 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 OR10H4Q8NGA5 316 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 OR52N1Q8NH53 320 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 NEIL3Q8TAT5 605 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 HOXB13Q92826 284 aaPredicted RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 RBM18Q96H35 190 aaKnown RBP13□□□□□ -0.33
UBXN11-214ENST00000475591 TXNDC15Q96J42 360 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 VSTM2LQ96N03 204 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF559Q9BR84 538 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 MED18Q9BUE0 208 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 ALG8Q9BVK2 526 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 TTTY10Q9BZA0 68 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 LRRN3Q9H3W5 708 aa13□□□□□ -0.33
UBXN11-214ENST00000475591 MN1Q10571 1320 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CCDC182A6NF36 153 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 FABP12A6NFH5 140 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 E9PI62 339 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 APOA1P02647 267 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 NKX2-5P52952 324 aaPredicted RBP12.99□□□□□ -0.33
UBXN11-214ENST00000475591 DAB2P98082 770 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CRMP1Q14194 572 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 GID4Q8IVV7 300 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 RBM12BQ8IXT5 1001 aaKnown RBP12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 ARL14Q8N4G2 192 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 LMF1Q96S06 567 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 LMF2Q9BU23 707 aaKnown RBP12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CMC2Q9NRP2 79 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 LRIT1Q9P2V4 623 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CHP2O43745 196 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 RCBTB2O95199 551 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 IMPDH2P12268 514 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 RNH1P13489 461 aaKnown RBP12.99□□□□□ -0.33
UBXN11-214ENST00000475591 IGFBP4P22692 258 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 CASP3P42574 277 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 FHL1Q13642 323 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 GXYLT1Q4G148 440 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 ALG10BQ5I7T1 473 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 ZNF613Q6PF04 617 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 KIRREL2Q6UWL6 708 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 OAFQ86UD1 273 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 AKAP14Q86UN6 197 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 UBE2J2Q8N2K1 259 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 ACBD7Q8N6N7 88 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 ERVK-19Q9WJR5 959 aa12.99□□□□□ -0.33
UBXN11-214ENST00000475591 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
UBXN11-214ENST00000475591 HPGDSO60760 199 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 PTP4A3O75365 173 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 CSF3P09919 207 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
UBXN11-214ENST00000475591 CHRNB1P11230 501 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 CRYZQ08257 329 aaKnown RBP12.98□□□□□ -0.33
UBXN11-214ENST00000475591 ZNHIT3Q15649 155 aaPredicted RBP12.98□□□□□ -0.33
UBXN11-214ENST00000475591 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 DDI2Q5TDH0 399 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 MMABQ96EY8 250 aaPredicted RBP12.98□□□□□ -0.33
UBXN11-214ENST00000475591 TEAD3Q99594 435 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 MCCC2Q9HCC0 563 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 PRTFDC1Q9NRG1 225 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 CLCA3PQ9Y6N3 262 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 FAM86C2PA6NEL3 165 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 TMCC2O75069 709 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 HLA-DPB1P04440 258 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 CTBP2P56545 445 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 NR2C2APQ86WQ0 139 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 GHDCQ8N2G8 530 aa12.98□□□□□ -0.33
UBXN11-214ENST00000475591 LRRC17Q8N6Y2 441 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms