RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 KLHL13Q9P2N7 655 aa6.24□□□□□ -1.41
HDAC3-207ENST00000475549 MED12LQ86YW9 2145 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PCNX3Q9H6A9 2034 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 A0A1W2PNR3 127 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 WDR91A4D1P6 747 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 DPRXA6NFQ7 191 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SERINC4A6NH21 518 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 OVOL3O00110 214 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 GTPBP1O00178 669 aaKnown RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 HS3ST1O14792 307 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SMAD9O15198 467 aaKnown RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF264O43296 627 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PRKD3O94806 890 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SYNGR4O95473 234 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 H6PDO95479 791 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 CNOT4O95628 575 aaKnown RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ADAP00813 363 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 YES1P07947 543 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 THBS1P07996 1170 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SOD3P08294 240 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 DANCRP0C864 163 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 DHRS4L1P0CG22 281 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ATP6V1C1P21283 382 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 MATN1P21941 496 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ME2P23368 584 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ELK4P28324 431 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 MAPK1P28482 360 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SERPINB5P36952 375 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PTH2RP49190 550 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 NR1H2P55055 460 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 RAC3P60763 192 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 FUT5Q11128 374 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SKP2Q13309 424 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 QPRTQ15274 297 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF141Q15928 474 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PGS1Q32NB8 556 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 LSM12Q3MHD2 195 aaKnown RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 TIGD2Q4W5G0 525 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 NCMAPQ5T1S8 102 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PDZK1Q5T2W1 519 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SFRP5Q5T4F7 317 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 OR4F3Q6IEY1 312 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 HEPHL1Q6MZM0 1159 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ALKBH2Q6NS38 261 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 FCRLAQ7L513 359 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF619Q8N2I2 560 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 RIBC1Q8N443 379 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ZNF611Q8N823 705 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 OR5W2Q8NH69 310 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 RFWD2Q8NHY2 731 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 SFXN5Q8TD22 340 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 AKAP1Q92667 903 aaKnown RBP eCLIP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 CPNE4Q96A23 557 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PKNOX2Q96KN3 472 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 TEX37Q96LM6 180 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PPP1R36Q96LQ0 422 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PSD2Q9BQI7 771 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 TMEM109Q9BVC6 243 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ROPN1BQ9BZX4 212 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 NMUR2Q9GZQ4 415 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 QRSL1Q9H0R6 528 aaKnown RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 OR10A4Q9H209 315 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ROPN1Q9HAT0 212 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 HHATLQ9HCP6 504 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ASIC5Q9NY37 505 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 STOML1Q9UBI4 398 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 PRSS50Q9UI38 385 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 MID2Q9UJV3 735 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 MKLN1Q9UL63 735 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 FAF1Q9UNN5 650 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 GPC6Q9Y625 555 aaPredicted RBP6.23□□□□□ -1.41
HDAC3-207ENST00000475549 JMJD1CQ15652 2540 aa6.23□□□□□ -1.41
HDAC3-207ENST00000475549 ROS1P08922 2347 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 CSPG4Q6UVK1 2322 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 CLDN24A6NM45 220 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 KIAA1324LA8MWY0 1029 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 RNASET2O00584 256 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 CFLARO15519 480 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 EIF4E2O60573 245 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 RAMP1O60894 148 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 SOX30O94993 753 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 NUDT14O95848 222 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 CD8AP01732 235 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PABPC4LP0CB38 370 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 OR12D1P0DN82 309 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 UBL4AP11441 157 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 IGHV1-2P23083 117 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PCSK6P29122 969 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 PGM1P36871 562 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 RPL3P39023 403 aaKnown RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 SUMO3P55854 103 aaPredicted RBP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 SESN3P58005 492 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 LSM11P83369 360 aaKnown RBP eCLIP6.22□□□□□ -1.41
HDAC3-207ENST00000475549 ITGADQ13349 1161 aa6.22□□□□□ -1.41
HDAC3-207ENST00000475549 TNK1Q13470 666 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms