RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 UBE2FQ969M7 185 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 LIN37Q96GY3 246 aaPredicted RBP9.38□□□□□ -0.91
PCCB-213ENST00000475214 Q96MT0 163 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 TAAR9Q96RI9 348 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 NODALQ96S42 347 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
PCCB-213ENST00000475214 TEX12Q9BXU0 123 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 PRRG3Q9BZD7 231 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 NRSN2Q9GZP1 204 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 CCDC90BQ9GZT6 254 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 AKIRIN1Q9H9L7 192 aaPredicted RBP9.38□□□□□ -0.91
PCCB-213ENST00000475214 SLC25A19Q9HC21 320 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 EXOSC3Q9NQT5 275 aaKnown RBP9.38□□□□□ -0.91
PCCB-213ENST00000475214 CLN6Q9NWW5 311 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 ZNF226Q9NYT6 803 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 FLRT3Q9NZU0 649 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 CNIH4Q9P003 139 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 AASSQ9UDR5 926 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
PCCB-213ENST00000475214 PTRH2Q9Y3E5 179 aaKnown RBP9.38□□□□□ -0.91
PCCB-213ENST00000475214 ASPMQ8IZT6 3477 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 CCDC187A0A096LP49 1063 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TRBV11-1A0A0K0K1C0 115 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SH3D21A4FU49 640 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 UNC119BA6NIH7 251 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TAF4O00268 1085 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 RGS10O43665 173 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 NDUFB5O43674 189 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 XPNPEP2O43895 674 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 ICOSLGO75144 302 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 CSO75390 466 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 WBP4O75554 376 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 ZFAND5O76080 213 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 STK17BO94768 372 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 OR6B1O95007 311 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 MT-CO3P00414 261 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TP53P04637 393 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 NGFRP08138 427 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 IGFBP1P08833 259 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 IFI30P13284 250 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 ABCD3P28288 659 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 FOLR3P41439 243 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 GPR4P46093 362 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SLC6A8P48029 635 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 GIPRP48546 466 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SNRPGP62308 76 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 SLC35A2P78381 396 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.91
PCCB-213ENST00000475214 CDK5Q00535 292 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 EIF3IQ13347 325 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 EFR3AQ14156 821 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 NCF4Q15080 339 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SMN1Q16637 294 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 FNDC7Q5VTL7 733 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 CDCP2Q5VXM1 449 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 WBP2NLQ6ICG8 309 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SLC27A4Q6P1M0 643 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 FAM198BQ6UWH4 519 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 ZNF517Q6ZMY9 492 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 GPR141Q7Z602 305 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SPARTQ8N0X7 666 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TMCO5AQ8N6Q1 288 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 CLDN22Q8N7P3 220 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 GATSQ8NAP1 163 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 GALNT6Q8NCL4 622 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 FAM71CQ8NEG0 241 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 DNAJA4Q8WW22 397 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 MYDGFQ969H8 173 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 DGCR14Q96DF8 476 aaKnown RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 DEPDC7Q96QD5 511 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 SLC38A2Q96QD8 506 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 GPA33Q99795 319 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 TUBA1CQ9BQE3 449 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 DDA1Q9BW61 102 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TBL1XR1Q9BZK7 514 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 LAT2Q9GZY6 243 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 DUSP21Q9H596 190 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TBC1D23Q9NUY8 699 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 TOR4AQ9NXH8 423 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 PISDQ9UG56 409 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 ZNF223Q9UK11 482 aaPredicted RBP9.37□□□□□ -0.91
PCCB-213ENST00000475214 PADI1Q9ULC6 663 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 NPFFR2Q9Y5X5 522 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 B3GALT1Q9Y5Z6 326 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 BAHCC1Q9P281 2608 aa9.37□□□□□ -0.91
PCCB-213ENST00000475214 COL27A1Q8IZC6 1860 aaPredicted RBP9.36□□□□□ -0.91
PCCB-213ENST00000475214 CACNA1GO43497 2377 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 LOC102723996A0A087X1L8 192 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 OR6C70A6NIJ9 312 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 KLF4O43474 513 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 EIF4E2O60573 245 aaKnown RBP9.36□□□□□ -0.91
PCCB-213ENST00000475214 PPM1BO75688 479 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 NTN1O95631 604 aa9.36□□□□□ -0.91
PCCB-213ENST00000475214 NAGAP17050 411 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms