RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 METTL3Q86U44 580 aaKnown RBP17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 LINC00469Q8N7U9 141 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 SMAP2Q8WU79 429 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 TMEM255BQ8WV15 326 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 ZG16BQ96DA0 208 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 NKX6-2Q9C056 277 aaPredicted RBP17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 GLIPR2Q9H4G4 154 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 FBXL3Q9UKT7 428 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 PLXNA2O75051 1894 aa17.29■□□□□ 0.36
ECHDC1-214ENST00000474289 NAP1L6A6NFF2 107 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 STX11O75558 287 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 SPDEFO95238 335 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 LATS1O95835 1130 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ECDO95905 644 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 GALTP07902 379 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 LASP1Q14847 261 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 TAF12Q16514 161 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ZNF311Q5JNZ3 666 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 UBE2NLQ5JXB2 153 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 HENMT1Q5T8I9 393 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 DMKNQ6E0U4 476 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 TMEM220Q6QAJ8 160 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 VRK2Q86Y07 508 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 PM20D2Q8IYS1 436 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 GJD3Q8N144 294 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 C2orf73Q8N5S3 287 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 OR52B4Q8NGK2 314 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 OR9A1PQ8NGU1 263 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 OR5J2Q8NH18 312 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 SP7Q8TDD2 431 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 PNPLA2Q96AD5 504 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ACSS1Q9NUB1 689 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ACTR10Q9NZ32 417 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 AKAP7Q9P0M2 348 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 MRTO4Q9UKD2 239 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 SLC6A5Q9Y345 797 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 AK6Q9Y3D8 172 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ANTXRLA6NF34 631 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 TMPRSS11DO60235 418 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 IGF2P01344 180 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 RLN2P04090 185 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 THY1P04216 161 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ZGLP1P0C6A0 271 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 MST1P26927 711 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 H2BFSP57053 126 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 TAS2R43P59537 309 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 PRPF38BQ5VTL8 546 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 Q6ZNB5 142 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 HDDC3Q8N4P3 179 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 RELL2Q8NC24 303 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 CHST14Q8NCH0 376 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 TIFAQ96CG3 184 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ARHGDIGQ99819 225 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 ZCCHC2Q9C0B9 1178 aaKnown RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 GPN1Q9HCN4 374 aaPredicted RBP17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 LHX9Q9NQ69 397 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 KCNE3Q9Y6H6 103 aa17.28■□□□□ 0.36
ECHDC1-214ENST00000474289 FGBP02675 491 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 NRG3P56975 720 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 AP3S2P59780 193 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 S100A12P80511 92 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 MAT1AQ00266 395 aaKnown RBP17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 TMEM115Q12893 351 aaPredicted RBP17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 DECR1Q16698 335 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 FAM129CQ86XR2 697 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 TRAM1L1Q8N609 369 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 OR5M1Q8NGP8 315 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 DERL3Q96Q80 235 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 FN3KQ9H479 309 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 FANCFQ9NPI8 374 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 SLC13A4Q9UKG4 626 aa17.27■□□□□ 0.36
ECHDC1-214ENST00000474289 ARPC4-TTLL3A0A0A6YYG9 625 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 A0A0G2JPF8 293 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 CDHR4A6H8M9 788 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 SNRPGP15A8MWD9 76 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 HNRNPCL3B7ZW38 293 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 GABARAPH6UMI1 98 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 H7C2Y5 167 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 KHDRBS3O75525 346 aaKnown RBP17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 HNRNPCL4P0DMR1 293 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 PYCR1P32322 319 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 SLC16A1P53985 500 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 MC2RQ01718 297 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 SCRN3Q0VDG4 424 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 GPNMBQ14956 572 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 C6orf132Q5T0Z8 1188 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 ARL14EPQ8N8R7 260 aaPredicted RBP17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 OR8K3Q8NH51 312 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 AMDHD1Q96NU7 426 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 IL17FQ96PD4 163 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 GINS4Q9BRT9 223 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 CPEB1Q9BZB8 566 aaKnown RBP17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 ESRP2Q9H6T0 727 aaKnown RBP17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 POLMQ9NP87 494 aaPredicted RBP17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 KCNK7Q9Y2U2 307 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 NUMA1Q14980 2115 aa17.27■□□□□ 0.35
ECHDC1-214ENST00000474289 F8W036 122 aa17.26■□□□□ 0.35
ECHDC1-214ENST00000474289 SYT5O00445 386 aa17.26■□□□□ 0.35
ECHDC1-214ENST00000474289 MAT2AP31153 395 aaKnown RBP17.26■□□□□ 0.35
ECHDC1-214ENST00000474289 C2orf68Q2NKX9 166 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms