RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ZNF442Q9H7R0 627 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 KCNS2Q9ULS6 477 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 DAPP1Q9UN19 280 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 KLF13Q9Y2Y9 288 aaPredicted RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 MYO18AQ92614 2054 aaKnown RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 TEX13DA0A0J9YY54 714 aaPredicted RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 A0A1W2PPK0 400 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 ISPDA4D126 451 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 CLDN25C9JDP6 229 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 L7N2F9 121 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 ARAFP10398 606 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 SLC2A2P11168 524 aaPredicted RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 ARNTP27540 789 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 VAMP2P63027 116 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 SRSF5Q13243 272 aaKnown RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 RNF220Q5VTB9 566 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 GABRG3Q99928 467 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 NRSN2Q9GZP1 204 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 CALHM2Q9HA72 323 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 NUFIP1Q9UHK0 495 aaKnown RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 SH3D21A4FU49 640 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 H0YIG0 161 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 CLPXO76031 633 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 ENPP1P22413 925 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 CFL1P23528 166 aaKnown RBP11.43□□□□□ -0.58
IRF1-208ENST00000472045 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 LIPKQ5VXJ0 399 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 LIMS2Q7Z4I7 341 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 PDSS2Q86YH6 399 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 GTF2H4Q92759 462 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 SMCHD1A6NHR9 2005 aa11.43□□□□□ -0.58
IRF1-208ENST00000472045 SMIM30A4D0T7 59 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 C5orf51A6NDU8 294 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 CCRL2O00421 344 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 TMEM225BP0DP42 221 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 C7P10643 843 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ELK4P28324 431 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 IL10RAQ13651 578 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 LRRN1Q6UXK5 716 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 CPOQ8IVL8 374 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 C8orf44Q96CB5 159 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ZMYND19Q96E35 227 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 DCAF13Q9NV06 445 aaKnown RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 KCNIP1Q9NZI2 227 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 DNAJB11Q9UBS4 358 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 WDR37Q9Y2I8 494 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 PLPP1O14494 284 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 RAD1O60671 282 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ADH7P40394 386 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ZNF750Q32MQ0 723 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 HBMQ6B0K9 141 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 GPR139Q6DWJ6 353 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 GUSBP11Q6P575 273 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 CPEB2Q7Z5Q1 589 aaKnown RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 SLC7A6OSQ96CW6 309 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 FAM71F1Q96KD3 344 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 LINC00615Q96LM1 132 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 OR10A2Q9H208 303 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 TCEAL2Q9H3H9 227 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 ERVK-18Q9QC07 812 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 LOC105369274A0A096LPK9 316 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 NUDT21O43809 227 aaKnown RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 ORC5O43913 435 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 SLC16A7O60669 478 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 FCER2P06734 321 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 EPHA8P29322 1005 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.58
IRF1-208ENST00000472045 OR4N4Q8N0Y3 316 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 NEIL3Q8TAT5 605 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 CHTF18Q8WVB6 975 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 GATAD2BQ8WXI9 593 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 MRGPRX3Q96LB0 322 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 POMT2Q9UKY4 750 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 TRAV27A0A087WT01 109 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 CLDN17P56750 224 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 TUBA3CQ13748 450 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 ZBED5Q49AG3 693 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 NIPAL3Q6P499 406 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 C3P1Q6ZMU1 363 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 PAQR7Q86WK9 346 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 TP53I13Q8NBR0 393 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 TUBA8Q9NY65 449 aaPredicted RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 MED11Q9P086 117 aa11.42□□□□□ -0.58
IRF1-208ENST00000472045 POLR2AP24928 1970 aaKnown RBP11.42□□□□□ -0.58
IRF1-208ENST00000472045 LOC100509620A0A075B734 347 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 LANCL3Q6ZV70 420 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 SLC16A14Q7RTX9 510 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 PPP1R35Q8TAP8 253 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 INTS14Q96SY0 518 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 MENTQ9BUN1 341 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 DNTTIP1Q9H147 329 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 TMED7-TICAM2A0A0A6YYA0 188 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 DISC1C4P0D8 188 aa11.41□□□□□ -0.58
IRF1-208ENST00000472045 EIF1BO60739 113 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms