RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FGFBP1Q14512 234 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 OR1Q1Q15612 314 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 ZBED5Q49AG3 693 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 HLA-DQA1Q5Y7H0 255 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 KCTD8Q6ZWB6 473 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 MBOAT2Q6ZWT7 520 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 GPR141Q7Z602 305 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 LAPTM4BQ86VI4 370 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF527Q8NB42 609 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 OR1N1Q8NGS0 311 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 TRUB1Q8WWH5 349 aaKnown RBP16.07■□□□□ 0.16
HSPG2-208ENST00000471322 EXTL1Q92935 676 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 NODALQ96S42 347 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 TRIM2Q9C040 744 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 DUSP21Q9H596 190 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 RASSF1Q9NS23 344 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 PLCXD1Q9NUJ7 323 aa16.07■□□□□ 0.16
HSPG2-208ENST00000471322 PTRH2Q9Y3E5 179 aaKnown RBP16.07■□□□□ 0.16
HSPG2-208ENST00000471322 C2orf92A0A1B0GVN3 265 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 PTGES3LE9PB15 166 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 H3BN98 237 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 KLF7O75840 302 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-208ENST00000471322 HEXBP07686 556 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 FMO3P31513 532 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 CDC20Q12834 499 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 TSPAN31Q12999 210 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 SLX4IPQ5VYV7 408 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 Q6ZPB1 254 aaPredicted RBP16.06■□□□□ 0.16
HSPG2-208ENST00000471322 SLC29A4Q7RTT9 530 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF440Q8IYI8 595 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF614Q8N883 585 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 METTL21AQ8WXB1 218 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 UBQLN4Q9NRR5 601 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 SLC35A3Q9Y2D2 325 aa16.06■□□□□ 0.16
HSPG2-208ENST00000471322 SH3D21A4FU49 640 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SERINC4A6NH21 518 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 VSTM2BA6NLU5 285 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 TO15178 435 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 FAM20BO75063 409 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 WBP4O75554 376 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 RAB40ALP0C0E4 278 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 ADH7P40394 386 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 GSSP48637 474 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 DEFB109BQ30KR1 87 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 MRPL14Q6P1L8 145 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SPARTQ8N0X7 666 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 C17orf47Q8NEP4 570 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 CNOT9Q92600 299 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 ADIPOR1Q96A54 375 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 HS6ST2Q96MM7 605 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NUDT9Q9BW91 350 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SLC26A1Q9H2B4 701 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SLC7A7Q9UM01 511 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 GKN3PP0CG01 181 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 PRG2P13727 222 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 FPR3P25089 353 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 HTR2AP28223 471 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 OTX2P32243 289 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 OMPP47874 163 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SLC35A2P78381 396 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NNATQ16517 81 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 KLHL26Q53HC5 615 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 CASP12Q6UXS9 341 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 RASSF6Q6ZTQ3 369 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 PTCHD4Q6ZW05 846 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 PRICKLE2Q7Z3G6 844 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NKAIN4Q8IVV8 208 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 LSMEM1Q8N8F7 131 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF321PQ8N8H1 164 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF540Q8NDQ6 660 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 SNRNP27Q8WVK2 155 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 APH1BQ8WW43 257 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 UBE2FQ969M7 185 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 Q96MT0 163 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NXF5Q9H1B4 397 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 DNAJB12Q9NXW2 375 aaKnown RBP16.05■□□□□ 0.16
HSPG2-208ENST00000471322 ZNF226Q9NYT6 803 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NTNG1Q9Y2I2 539 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 PCDHGB1Q9Y5G3 927 aa16.05■□□□□ 0.16
HSPG2-208ENST00000471322 NINQ8N4C6 2090 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 FAM208BQ5VWN6 2430 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 IDSB3KWA1 339 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 XPNPEP2O43895 674 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 ALOX12BO75342 701 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 THY1P04216 161 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 HPGDP15428 266 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 GABRB1P18505 474 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 KRT20P35900 424 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 EFNA3P52797 238 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 EMP2P54851 167 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 SNRPGP62308 76 aaKnown RBP16.04■□□□□ 0.16
HSPG2-208ENST00000471322 TUBA3CQ13748 450 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 EBPQ15125 230 aaKnown RBP16.04■□□□□ 0.16
HSPG2-208ENST00000471322 SVOPQ8N4V2 548 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 HSPBAP1Q96EW2 488 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 MPP4Q96JB8 637 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 MESP1Q9BRJ9 268 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 RBM38Q9H0Z9 239 aaKnown RBP16.04■□□□□ 0.16
HSPG2-208ENST00000471322 CLN6Q9NWW5 311 aa16.04■□□□□ 0.16
HSPG2-208ENST00000471322 NXT1Q9UKK6 140 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms