RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NINQ8N4C6 2090 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 FN1P02751 2386 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 DOCK7Q96N67 2140 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ELOVL7A1L3X0 281 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SH3D21A4FU49 640 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 GNB5O14775 395 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SNPHO15079 494 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TNFRSF21O75509 655 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 CIB2O75838 187 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 PDE5AO76074 875 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 STAMBPO95630 424 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 C1QCP02747 245 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ETFAP13804 333 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 CHMP24386 653 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 GCKP35557 465 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 PTGDSP41222 190 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 GZMMP51124 257 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EEF1A1P68104 462 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ZNF155Q12901 538 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SNTA1Q13424 505 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EXOSC7Q15024 291 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 POU4F3Q15319 338 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TOMM20Q15388 145 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ZNHIT3Q15649 155 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 FXNQ16595 210 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 Q5PR19 223 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 COX20Q5RI15 118 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EXOSC6Q5RKV6 272 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EEF1A1P5Q5VTE0 462 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SLC30A6Q6NXT4 461 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TNFAIP8L2Q6P589 184 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ENPP6Q6UWR7 440 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 LUZP2Q86TE4 346 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 YRDCQ86U90 279 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SLC30A8Q8IWU4 369 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 MICU2Q8IYU8 434 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 PRR22Q8IZ63 422 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 METTL25Q8N6Q8 603 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 RNF148Q8N7C7 305 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 C11orf65Q8NCR3 313 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ADAMTS15Q8TE58 950 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 JADE3Q92613 823 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 HOXB13Q92826 284 aaPredicted RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 WNT2BQ93097 391 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 HGDQ93099 445 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ASB9Q96DX5 294 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 CLPTM1LQ96KA5 538 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 OR7D2Q96RA2 312 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 STACQ99469 402 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TUBA1CQ9BQE3 449 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 LMF2Q9BU23 707 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 G6PC3Q9BUM1 346 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 OSBPL11Q9BXB4 747 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 OR2B2Q9GZK3 357 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 NXF5Q9H1B4 397 aaKnown RBP8.2□□□□□ -1.1
SF3A1-206ENST00000471037 OR51I1Q9H343 314 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 PIGMQ9H3S5 423 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SERHL2Q9H4I8 314 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 METTL7AQ9H8H3 244 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 ANKRA2Q9H9E1 313 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 A4GALTQ9NPC4 353 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EQTNQ9NQ60 294 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 DUSP22Q9NRW4 184 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 GIN1Q9NXP7 522 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 CLCF1Q9UBD9 225 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 P2RX2Q9UBL9 471 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 SLC7A8Q9UHI5 535 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 DTX4Q9Y2E6 619 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 TESMINQ9Y4I5 508 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 EXPH5Q8NEV8 1989 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 FREM3P0C091 2139 aa8.2□□□□□ -1.1
SF3A1-206ENST00000471037 MPDZO75970 2070 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 A8MXE2 369 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 H0Y3Z8 333 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 HMGN4O00479 90 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 ACOX3O15254 700 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 ICOSLGO75144 302 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 CBR3O75828 277 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 NKX2-2O95096 273 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 LY6G6DO95868 133 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 AK1P00568 194 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 ALOX5P09917 674 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 ARAFP10398 606 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 TCN1P20061 433 aaPredicted RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PCGF2P35227 344 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 MAP3K8P41279 467 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 EMDP50402 254 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 GFRA1P56159 465 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 RPS26P62854 115 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 PSPHP78330 225 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 TRAP1Q12931 704 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 VEZF1Q14119 521 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 TRIM25Q14258 630 aaKnown RBP8.19□□□□□ -1.1
SF3A1-206ENST00000471037 GNA13Q14344 377 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 VMACQ2NL98 169 aa8.19□□□□□ -1.1
SF3A1-206ENST00000471037 ATAD3BQ5T9A4 648 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms