RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 GBX2P52951 348 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-205ENST00000469550 MAP4K2Q12851 820 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-205ENST00000469550 TRAM1Q15629 374 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 C22orf39Q6P5X5 142 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 PLEKHM3Q6ZWE6 761 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 BTN2A1Q7KYR7 527 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 GPR135Q8IZ08 494 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 UXS1Q8NBZ7 420 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 OR8D4Q8NGM9 314 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 BBS10Q8TAM1 723 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 SPRYD4Q8WW59 207 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-205ENST00000469550 OSTF1Q92882 214 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 FAM131CQ96AQ9 280 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 ANKRD19PQ9H560 264 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 EGLN3Q9H6Z9 239 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 DLL4Q9NR61 685 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 ACSS1Q9NUB1 689 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-205ENST00000469550 CD84Q9UIB8 345 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 ZFYVE26Q68DK2 2539 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 CCDC88CQ9P219 2028 aa8.91□□□□□ -0.98
HDAC3-205ENST00000469550 SPEGQ15772 3267 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 TRAV6A0A075B6T7 132 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 A0A087WUU8 490 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 H0Y8X5 98 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 J3QRE1 110 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 M0R3H8 397 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SURF4O15260 269 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 YKT6O15498 198 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ITGA10O75578 1167 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SERPINI2O75830 405 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 EIF4EP06730 217 aaKnown RBP8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ACP5P13686 325 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ZP3P21754 424 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 VIPR1P32241 457 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 STAT5AP42229 794 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 PREPP48147 710 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF81P51508 661 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 MMP15P51511 669 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 PITPNAQ00169 270 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 CST6Q15828 149 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 GSG1Q2KHT4 349 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SPDYE7PQ495Y7 208 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 C9orf64Q5T6V5 341 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 GARNL3Q5VVW2 1013 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SMARCD3Q6STE5 483 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SHFQ7M4L6 423 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 NR2C2APQ86WQ0 139 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 RASGEF1AQ8N9B8 481 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 HSD17B8Q92506 261 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SCAMP4Q969E2 229 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 TM4SF18Q96CE8 201 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 AHCYL2Q96HN2 611 aaKnown RBP8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ABHD1Q96SE0 405 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 CACNG6Q9BXT2 260 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 TMEM168Q9H0V1 697 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 BABAM2Q9NXR7 383 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 PTGFRNQ9P2B2 879 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 ZNF624Q9P2J8 865 aaPredicted RBP8.9□□□□□ -0.98
HDAC3-205ENST00000469550 GLS2Q9UI32 602 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 SH2B3Q9UQQ2 575 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 GPR52Q9Y2T5 361 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 PCDHGA1Q9Y5H4 931 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 CABIN1Q9Y6J0 2220 aa8.9□□□□□ -0.98
HDAC3-205ENST00000469550 EDDM13A0A1B0GTR0 161 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 A0A1W2PPL8 197 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 PRAMEF27A3QJZ7 478 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 LRRC72A6NJI9 287 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SYT5O00445 386 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 EEF1E1O43324 174 aaKnown RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 UBL3O95164 117 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 EPPINO95925 133 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 CCT3P49368 545 aaKnown RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 DHODHQ02127 395 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 GNA13Q14344 377 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SYPL1Q16563 259 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 ZNF658BQ4V348 819 aaPredicted RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 HENMT1Q5T8I9 393 aaKnown RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 NDUFAF5Q5TEU4 345 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 PRAMEF8Q5VWM4 474 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 PRAMEF7Q5VXH5 474 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SLC22A10Q63ZE4 541 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SEZ6L2Q6UXD5 910 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 HSD11B1LQ7Z5J1 315 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 COMTD1Q86VU5 262 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 KLBQ86Z14 1044 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 MMP21Q8N119 569 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 TOMM5Q8N4H5 51 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 MS4A15Q8N5U1 240 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SRFBP1Q8NEF9 429 aaKnown RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 OR4F15Q8NGB8 312 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 OR6T1Q8NGN1 323 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 OR9A1PQ8NGU1 263 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 OR56B4Q8NH76 319 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 WBP1Q96G27 269 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 ERMAPQ96PL5 475 aaPredicted RBP8.9□□□□□ -0.99
HDAC3-205ENST00000469550 PINK1Q9BXM7 581 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 RHBGQ9H310 441 aa8.9□□□□□ -0.99
HDAC3-205ENST00000469550 SERHL2Q9H4I8 314 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms