RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 GCM2O75603 506 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 MFN2O95140 757 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ESRRAP11474 423 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 PEPDP12955 493 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 GABRA1P14867 456 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 CPN1P15169 458 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ZNF708P17019 499 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 PRKCAP17252 672 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 PSMA4P25789 261 aaKnown RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 SLC6A8P48029 635 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 MNAT1P51948 309 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 SESN3P58005 492 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 LIPEQ05469 1076 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 DMTNQ08495 405 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 FOXF1Q12946 379 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 VEZF1Q14119 521 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 BCL2A1Q16548 175 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 SLC25A53Q5H9E4 307 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ZNF585AQ6P3V2 769 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 DHRS4L2Q6PKH6 230 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ZNF550Q7Z398 422 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 PATL1Q86TB9 770 aaKnown RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 FJX1Q86VR8 437 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ARMC8Q8IUR7 673 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 PM20D2Q8IYS1 436 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 EID3Q8N140 333 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 FBXO27Q8NI29 283 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 MRGPRX4Q96LA9 322 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 RNF145Q96MT1 663 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 NPAS1Q99742 590 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 RSPO3Q9BXY4 272 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 TMEM181Q9P2C4 612 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ABCD2Q9UBJ2 740 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ERRFI1Q9UJM3 462 aaPredicted RBP10.8□□□□□ -0.68
VPS13D-204ENST00000469054 USP22Q9UPT9 525 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 SLC5A6Q9Y289 635 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 AP4B1Q9Y6B7 739 aa10.8□□□□□ -0.68
VPS13D-204ENST00000469054 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 E9PLN8 166 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 H3BML4 177 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 FAAHO00519 579 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 CCL21O00585 134 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 TPST1O60507 370 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 SEMA7AO75326 666 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 NTN1O95631 604 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 HOXD4P09016 255 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 GKN3PP0CG01 181 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 UQCRBP14927 111 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 POU3F2P20265 443 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 CALB2P22676 271 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ACVR2AP27037 513 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 PTGER4P35408 488 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 DLX5P56178 289 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 CLDN18P56856 261 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 EEFSECP57772 596 aaKnown RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 SLC25A3Q00325 362 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 SRYQ05066 204 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 EPS8Q12929 822 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 C3P1Q6ZMU1 363 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 CCDC80Q76M96 950 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ULK2Q8IYT8 1036 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 FAM26EQ8N5C1 309 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 SMYD1Q8NB12 490 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ZPLD1Q8TCW7 415 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ST8SIA1Q92185 356 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 PINK1Q9BXM7 581 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ALG2Q9H553 416 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ACER3Q9NUN7 267 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 NDE1Q9NXR1 346 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ADA2Q9NZK5 511 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 GMPR2Q9P2T1 348 aaKnown RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 STOML1Q9UBI4 398 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 PRDM4Q9UKN5 801 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 CAMK2AQ9UQM7 478 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 MEMO1Q9Y316 297 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 ESPL1Q14674 2120 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 RP1L1Q8IWN7 2480 aaPredicted RBP10.79□□□□□ -0.68
VPS13D-204ENST00000469054 RELNP78509 3460 aa10.79□□□□□ -0.68
VPS13D-204ENST00000469054 B2RBV5 119 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 AP3D1O14617 1153 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 EFNA2O43921 213 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 EPPINO95925 133 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 OPN1SWP03999 348 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 ELK4P28324 431 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 ACAA2P42765 397 aaKnown RBP10.78□□□□□ -0.68
VPS13D-204ENST00000469054 IDH2P48735 452 aaKnown RBP10.78□□□□□ -0.68
VPS13D-204ENST00000469054 GSK3BP49841 420 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 RAC1P63000 192 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 MXRA7P84157 204 aa10.78□□□□□ -0.68
VPS13D-204ENST00000469054 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS13D-204ENST00000469054 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.682e-7■■■■■ 71.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms