RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 ZNF702PQ9H963 129 aa3.19□□□□□ -1.9
SLF1-203ENST00000466957 DDX28Q9NUL7 540 aaKnown RBP3.19□□□□□ -1.9
SLF1-203ENST00000466957 AATFQ9NY61 560 aaKnown RBP eCLIP3.19□□□□□ -1.9
SLF1-203ENST00000466957 HMG20BQ9P0W2 317 aa3.19□□□□□ -1.9
SLF1-203ENST00000466957 CTNNA3Q9UI47 895 aa3.19□□□□□ -1.9
SLF1-203ENST00000466957 MRTO4Q9UKD2 239 aaKnown RBP3.19□□□□□ -1.9
SLF1-203ENST00000466957 BARX2Q9UMQ3 279 aaPredicted RBP3.19□□□□□ -1.9
SLF1-203ENST00000466957 MRPS2Q9Y399 296 aaKnown RBP3.19□□□□□ -1.9
SLF1-203ENST00000466957 RALGAPA2Q2PPJ7 1873 aa3.19□□□□□ -1.9
SLF1-203ENST00000466957 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
SLF1-203ENST00000466957 B4DXG7 233 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 TSPAN2O60636 221 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 SLC2A10O95528 541 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 CXCL10P02778 98 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 UGT1A6P19224 532 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 FUT3P21217 361 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 ATP6V1E1P36543 226 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 EFNA3P52797 238 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 HMGN5P82970 282 aaKnown RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 CDKL1Q00532 357 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 UBXN1Q04323 297 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 TSTA3Q13630 321 aaPredicted RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 RHBDD2Q6NTF9 364 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 SASS6Q6UVJ0 657 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 GET4Q7L5D6 327 aaPredicted RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 CADM2Q8N3J6 435 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 VN1R2Q8NFZ6 395 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 EXOC6Q8TAG9 804 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 ZNF721Q8TF20 911 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 SNX21Q969T3 373 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 MRPL53Q96EL3 112 aaKnown RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 C9orf85Q96MD7 179 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 GPR137Q96N19 417 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 C19orf24Q9BVV8 132 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 DCLRE1BQ9H816 532 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 YY1AP1Q9H869 796 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 HPS4Q9NQG7 708 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 CYP39A1Q9NYL5 469 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 DIMT1Q9UNQ2 313 aaKnown RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 MICAL3Q7RTP6 2002 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 SCN10AQ9Y5Y9 1956 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 NLRC5Q86WI3 1866 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 TANC1Q9C0D5 1861 aa3.18□□□□□ -1.9
SLF1-203ENST00000466957 MYO5AQ9Y4I1 1855 aaKnown RBP3.18□□□□□ -1.9
SLF1-203ENST00000466957 MYO18BQ8IUG5 2567 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 FANCMQ8IYD8 2048 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 MYH1P12882 1939 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 UQCRHLA0A096LP55 91 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 YJEFN3A6XGL0 299 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 CHEK1O14757 476 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 GMNNO75496 209 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 OLFM2O95897 454 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 FCER2P06734 321 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 UQCRHP07919 91 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 ALPIP09923 528 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 PSG2P11465 335 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 GEMP55040 296 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 LINC00315P59091 139 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 HERV-K104P63124 156 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 GABPB1Q06547 395 aaPredicted RBP3.17□□□□□ -1.9
SLF1-203ENST00000466957 KRT31Q15323 416 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 IL17AQ16552 155 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 HFEQ30201 348 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 STEAP1BQ6NZ63 245 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 MOB1BQ7L9L4 216 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 LUZP1Q86V48 1076 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 MYOCDQ8IZQ8 938 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 FAM133AQ8N9E0 248 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 CXorf58Q96LI9 332 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 FAM173AQ9BQD7 235 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 SLC25A39Q9BZJ4 359 aaPredicted RBP3.17□□□□□ -1.9
SLF1-203ENST00000466957 PIGVQ9NUD9 493 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 CHMP5Q9NZZ3 219 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 AKAP7Q9P0M2 348 aaPredicted RBP3.17□□□□□ -1.9
SLF1-203ENST00000466957 APPL1Q9UKG1 709 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 RNF115Q9Y4L5 304 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 ATG4BQ9Y4P1 393 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 FREM2Q5SZK8 3169 aa3.17□□□□□ -1.9
SLF1-203ENST00000466957 SMG1Q96Q15 3661 aaKnown RBP3.17□□□□□ -1.9
SLF1-203ENST00000466957 FOCADQ5VW36 1801 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 HECTD1Q9ULT8 2610 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 IGLV3-16A0A075B6K0 115 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 C5orf67F2Z3F1 127 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 DDX39AO00148 427 aaKnown RBP3.16□□□□□ -1.9
SLF1-203ENST00000466957 MPHOSPH10O00566 681 aaKnown RBP3.16□□□□□ -1.9
SLF1-203ENST00000466957 ARPC1BO15143 372 aaKnown RBP3.16□□□□□ -1.9
SLF1-203ENST00000466957 FOXH1O75593 365 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 BAG2O95816 211 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 ZP3P21754 424 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 NSFP46459 744 aaKnown RBP3.16□□□□□ -1.9
SLF1-203ENST00000466957 AP1B1Q10567 949 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 HERPUD1Q15011 391 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 N4BP2L1Q5TBK1 243 aaPredicted RBP3.16□□□□□ -1.9
SLF1-203ENST00000466957 NKAIN2Q5VXU1 208 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 RTL6Q6ICC9 239 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 MFSD7Q6UXD7 560 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 TFAP2EQ6VUC0 442 aa3.16□□□□□ -1.9
SLF1-203ENST00000466957 STOX1Q6ZVD7 989 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms