RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 INTS1Q8N201 2190 aaKnown RBP8.54□□□□□ -1.04
SDCCAG3-208ENST00000466579 CDHR4A6H8M9 788 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 GMNCA6NCL1 334 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CLCA1A8K7I4 914 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 EVPLLA8MZ36 301 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SHISA8B8ZZ34 492 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 H0Y3Z8 333 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 FXYD1O00168 92 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SNX3O60493 162 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ADAM11O75078 769 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 RCBTB2O95199 551 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 PGM3O95394 542 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 IL18BPO95998 194 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 BCHEP06276 602 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ETS2P15036 469 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 IGFBP2P18065 325 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 PGCP20142 388 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SLC6A8P48029 635 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SEC24CP53992 1094 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CLDN20P56880 219 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 EEF1A1P68104 462 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 TFF3Q07654 80 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 FOXF1Q12946 379 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 QPRTQ15274 297 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 MAPRE2Q15555 327 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CTU2Q2VPK5 515 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 TRMT5Q32P41 509 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 GCNT6Q5T4J0 391 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 RNF220Q5VTB9 566 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SPATA21Q7Z572 469 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CCDC71Q8IV32 467 aaPredicted RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 PEX5LQ8IYB4 626 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 MEIOBQ8N635 442 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF614Q8N883 585 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 C9orf106Q8NAJ2 232 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 NAXEQ8NCW5 288 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 TNIP2Q8NFZ5 429 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 BBS10Q8TAM1 723 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 WDR60Q8WVS4 1066 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 MAL2Q969L2 176 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SDCCAG3Q96C92 435 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 RNF145Q96MT1 663 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 THUMPD3Q9BV44 507 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CCDC106Q9BWC9 280 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 MYLK2Q9H1R3 596 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 KAT8Q9H7Z6 458 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 PAQR5Q9NXK6 330 aaPredicted RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 DNAJB12Q9NXW2 375 aaKnown RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ALKBH4Q9NXW9 302 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 STOML1Q9UBI4 398 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF629Q9UEG4 869 aaPredicted RBP8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 IFT52Q9Y366 437 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 ZNF175Q9Y473 711 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 CHST2Q9Y4C5 530 aa8.53□□□□□ -1.04
SDCCAG3-208ENST00000466579 SETXQ7Z333 2677 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 A1L4Q6 167 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMEM247A6NEH6 219 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CLDN24A6NM45 220 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 H0YC42 278 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 H3BML4 177 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 GMFGO60234 142 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CCDC22O60826 627 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 IL2RAP01589 272 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 IL11P20809 199 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 TCEA1P23193 301 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 HTR1EP28566 365 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 RNF144AP50876 292 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 GZMMP51124 257 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF136P52737 540 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 TPD52P55327 224 aaPredicted RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 PCBP3P57721 371 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SESN3P58005 492 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CDK6Q00534 326 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SRYQ05066 204 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 RBBP4Q09028 425 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 EPS8Q12929 822 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SELENBP1Q13228 472 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 NFYCQ13952 458 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SELPLGQ14242 412 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 GUSBP1Q15486 140 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SLC25A35Q3KQZ1 300 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 FBXL19-AS1Q494R0 122 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 LIN52Q52LA3 116 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 MRPL2Q5T653 305 aaKnown RBP8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 EEF1A1P5Q5VTE0 462 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CRYBG3Q68DQ2 2970 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF836Q6ZNA1 936 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ESPNLQ6ZVH7 1005 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 SERPINA11Q86U17 422 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 PTOV1Q86YD1 416 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 ZNF440Q8IYI8 595 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR8J3Q8NGG0 315 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 OR52P1PQ8NH57 321 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 FBXO27Q8NI29 283 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 CA5BP1Q8WTZ4 195 aa8.52□□□□□ -1.05
SDCCAG3-208ENST00000466579 TMEM234Q8WY98 164 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms