RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 ETV2O00321 342 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 NDUFAB1O14561 156 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 HOXD4P09016 255 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PEPDP12955 493 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PRKCAP17252 672 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PGCP20142 388 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 POU3F2P20265 443 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PSMA4P25789 261 aaKnown RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ADH6P28332 368 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PTGER4P35408 488 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 SLC6A8P48029 635 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 STARP49675 285 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 CLDN18P56856 261 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 FOXF1Q12946 379 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 QPRTQ15274 297 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 BCL2A1Q16548 175 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF311Q5JNZ3 666 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 C1orf185Q5T7R7 199 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 MTFR2Q6P444 385 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 GRAMD2AQ8IUY3 354 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 FITM2Q8N6M3 262 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 BCAS4Q8TDM0 211 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 PHF10Q8WUB8 498 aaKnown RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ST8SIA1Q92185 356 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF524Q96C55 264 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 CCDC120Q96HB5 630 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 REXO5Q96IC2 774 aaKnown RBP18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ZNF607Q96SK3 696 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 SPATA5L1Q9BVQ7 753 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 ALKBH4Q9NXW9 302 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 AP3M1Q9Y2T2 418 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 CHST2Q9Y4C5 530 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 FAM215AQ9Y5M1 114 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 DOCK7Q96N67 2140 aa18.34■□□□□ 0.53
PTCD3-206ENST00000465560 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 H3BML4 177 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ADAM11O75078 769 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 NTN1O95631 604 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 LDLRP01130 860 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ELK4P28324 431 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 AQP1P29972 269 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 PRKAR1BP31321 381 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 VMACQ2NL98 169 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 SLC25A53Q5H9E4 307 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 RTL6Q6ICC9 239 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ZNF440Q8IYI8 595 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 TMEM234Q8WY98 164 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 MRGPRX4Q96LA9 322 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ZNF583Q96ND8 569 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 PIF1Q9H611 641 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ARMC7Q9H6L4 198 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 ARL8BQ9NVJ2 186 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 RLIMQ9NVW2 624 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 CMTM6Q9NX76 183 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 TAGLN3Q9UI15 199 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 AP4B1Q9Y6B7 739 aa18.33■□□□□ 0.52
PTCD3-206ENST00000465560 FAM220BPB1ANY3 271 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 H0Y3Z8 333 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 CPA2P48052 419 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 DLX5P56178 289 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 SRYQ05066 204 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 KRT72Q14CN4 511 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 SF3B4Q15427 424 aaKnown RBP eCLIP18.32■□□□□ 0.522e-6■■■□□ 16.4
PTCD3-206ENST00000465560 ACSF3Q4G176 576 aaPredicted RBP18.32■□□□□ 0.52
PTCD3-206ENST00000465560 INTS11Q5TA45 600 aaKnown RBP18.32■□□□□ 0.52
PTCD3-206ENST00000465560 ERICH5Q6P6B1 374 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 DHRS4L2Q6PKH6 230 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 B3GNT6Q6ZMB0 384 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 SLC15A3Q8IY34 581 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 CLIP4Q8N3C7 705 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 RPRMLQ8N4K4 120 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 MARVELD2Q8N4S9 558 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 FBXO27Q8NI29 283 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 ZPLD1Q8TCW7 415 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 SSC4DQ8WTU2 575 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 STOML1Q9UBI4 398 aa18.32■□□□□ 0.52
PTCD3-206ENST00000465560 DOPEY1Q5JWR5 2465 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 CFAP73A6NFT4 308 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 WIPF3A6NGB9 483 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 CCT8L1PA6NM43 557 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 FAAHO00519 579 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 SERPINB7O75635 380 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 RYKP34925 604 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 SLC7A2P52569 658 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 SESN3P58005 492 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 RAC1P63000 192 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 ADORA2A-AS1P86434 159 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 EPS8Q12929 822 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 TMEM211Q6ICI0 200 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 NCCRP1Q6ZVX7 275 aaPredicted RBP18.31■□□□□ 0.52
PTCD3-206ENST00000465560 MEIOBQ8N635 442 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 BHLHE22Q8NFJ8 381 aaPredicted RBP18.31■□□□□ 0.52
PTCD3-206ENST00000465560 ZNF563Q8TA94 476 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 SLC35B4Q969S0 331 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 RSPO3Q9BXY4 272 aaPredicted RBP18.31■□□□□ 0.52
PTCD3-206ENST00000465560 ACER3Q9NUN7 267 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 DOPEY2Q9Y3R5 2298 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 MED12LQ86YW9 2145 aa18.31■□□□□ 0.52
PTCD3-206ENST00000465560 BAHCC1Q9P281 2608 aa18.3■□□□□ 0.52
PTCD3-206ENST00000465560 SPTBN1Q01082 2364 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms