RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SPATA16Q9BXB7 569 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 FGF22Q9HCT0 170 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 ABCC13Q9NSE7 274 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 SPATA2Q9UM82 520 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 SCML2Q9UQR0 700 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 AK6Q9Y3D8 172 aaKnown RBP4.73□□□□□ -1.65
COPS3-205ENST00000463097 CPQQ9Y646 472 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 AUP1Q9Y679 476 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 PLXNC1O60486 1568 aa4.73□□□□□ -1.65
COPS3-205ENST00000463097 ABCC5O15440 1437 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 PIK3C2GO75747 1445 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 ABCC2Q92887 1545 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 UQCRHLA0A096LP55 91 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 ACOD1A6NK06 481 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 OR2AG2A6NM03 316 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 ERVV-2B6SEH9 535 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 H3BMQ9 156 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 HAS3O00219 553 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 PDHXO00330 501 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 DFNA5O60443 496 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 SNAP91O60641 907 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 CDH16O75309 829 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 ZFAND5O76080 213 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 IGHV3-9P01782 118 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 UQCRHP07919 91 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 SNRPCP09234 159 aaKnown RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 STAG3L3P0CL85 134 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 ANOS1P23352 680 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 SPRP35270 261 aaPredicted RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 RIDAP52758 137 aaKnown RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 GSCP56915 257 aaPredicted RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 KLRB1Q12918 225 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 TMED1Q13445 227 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 PEX6Q13608 980 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 CCL14Q16627 93 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 TIGITQ495A1 244 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 XKR7Q5GH72 579 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 RAET1LQ5VY80 246 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 TMEM107Q6UX40 140 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 TMCO2Q7Z6W1 182 aaPredicted RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 SLC35F2Q8IXU6 374 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 PDCL2Q8N4E4 241 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 KIR3DL3Q8N743 410 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 CEP112Q8N8E3 955 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 AQP11Q8NBQ7 271 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 CRYGNQ8WXF5 182 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 EFHD2Q96C19 240 aaPredicted RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 OR5B2Q96R09 309 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 TRIM62Q9BVG3 475 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 GLIPR2Q9H4G4 154 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 VCPKMTQ9H867 229 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 SDF2L1Q9HCN8 221 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 KLHL28Q9NXS3 571 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 CHTOPQ9Y3Y2 248 aaKnown RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 UHRF1BP1LA0JNW5 1464 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 KDM6BO15054 1643 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 DNMT1P26358 1616 aaKnown RBP4.72□□□□□ -1.65
COPS3-205ENST00000463097 KDM5DQ9BY66 1539 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 NUP160Q12769 1436 aa4.72□□□□□ -1.65
COPS3-205ENST00000463097 PLEKHG2Q9H7P9 1386 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 A0A087X002 238 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 IGHV2-70DA0A0C4DH43 119 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 TRABD2BA6NFA1 517 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 FAM25EA8MYX2 175 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 F5H6K3 240 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 GOLGA8SH3BPF8 625 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 NTN3O00634 580 aaPredicted RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 RAMP3O60896 148 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 DIRAS1O95057 198 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 HPP00738 406 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 CST1P01037 141 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 ZNF26P17031 533 aaPredicted RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 HMGB2P26583 209 aaKnown RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 GCAP28676 217 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 ARHGDIAP52565 204 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 SH3BGRP55822 239 aaPredicted RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 KLRC3Q07444 240 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 ZNF154Q13106 437 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 GK3PQ14409 553 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 SLC15A2Q16348 729 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 HADHQ16836 314 aaKnown RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 CYP51A1Q16850 503 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 FAM120AOSQ5T036 256 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 OTUD3Q5T2D3 398 aaPredicted RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 PAQR6Q6TCH4 344 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 FGFRL1Q8N441 504 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 BEST4Q8NFU0 473 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 OR2L3Q8NG85 312 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 OR52K1Q8NGK4 314 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 FAM76AQ8TAV0 307 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 TAF15Q92804 592 aaKnown RBP eCLIP4.71□□□□□ -1.66
COPS3-205ENST00000463097 TIMD4Q96H15 378 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 PGLYRP2Q96PD5 576 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 CLSTN2Q9H4D0 955 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 FANCEQ9HB96 536 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 SLC7A8Q9UHI5 535 aa4.71□□□□□ -1.66
COPS3-205ENST00000463097 NAP1L2Q9ULW6 460 aaPredicted RBP4.71□□□□□ -1.66
COPS3-205ENST00000463097 PRPF19Q9UMS4 504 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms