RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZNF41P51814 821 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 DVL1P1P54792 670 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 FOXG1P55316 489 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 HILS1P60008 231 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 RAC3P60763 192 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 PHC1P78364 1004 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 DEFA6Q01524 100 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 CHRNB3Q05901 458 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 GABRA6Q16445 453 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 FAM83EQ2M2I3 478 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 AWAT1Q58HT5 328 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 TCHHL1Q5QJ38 904 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 RAPH1Q70E73 1250 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 USP43Q70EL4 1123 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MISPQ8IVT2 679 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 C3orf56Q8N813 242 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 CEP112Q8N8E3 955 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 WDR31Q8NA23 367 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 SPC24Q8NBT2 197 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 OR52N5Q8NH56 324 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ZNF483Q8TF39 744 aaPredicted RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 UBASH3BQ8TF42 649 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 C16orf78Q8WTQ4 265 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 SELENOMQ8WWX9 145 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 PIK3R3Q92569 461 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ELP4Q96EB1 424 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 GIMAP5Q96F15 307 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MRGPRX4Q96LA9 322 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MUS81Q96NY9 551 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ACPTQ9BZG2 426 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 GLIPR2Q9H4G4 154 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ELOVL6Q9H5J4 265 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 HHATLQ9HCP6 504 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 TIGARQ9NQ88 270 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 PFDN4Q9NQP4 134 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 SIRT5Q9NXA8 310 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 TAS2R7Q9NYW3 318 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 CPSF2Q9P2I0 782 aaKnown RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 TXNDC16Q9P2K2 825 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 VPS29Q9UBQ0 182 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MALT1Q9UDY8 824 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 MRTO4Q9UKD2 239 aaKnown RBP6.73□□□□□ -1.33
SMC3-202ENST00000462899 POU2F3Q9UKI9 436 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 ACTL7BQ9Y614 415 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 PMF1-BGLAPU3KQ54 211 aa6.73□□□□□ -1.33
SMC3-202ENST00000462899 A0A1W2PR80 420 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TTC36A6NLP5 189 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ZNF716A6NP11 495 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ATP6V1G2-DDX39BF2Z307 99 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ZNF195O14628 629 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 EIF3HO15372 352 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC3-202ENST00000462899 STAMBPO95630 424 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 IGHA1P01876 353 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 JUNP05412 331 aaKnown RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 GSTA2P09210 222 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 NOS3P29474 1203 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TIA1P31483 386 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMC3-202ENST00000462899 SRP14P37108 136 aaKnown RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 MAGEA12P43365 314 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 RFX3P48380 749 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ACTG1P63261 375 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 DR1Q01658 176 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ZNF117Q03924 483 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 LGALS3BPQ08380 585 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 RASGEF1BQ0VAM2 473 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 RIN1Q13671 783 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 HEPACAMQ14CZ8 416 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TOMM34Q15785 309 aaPredicted RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 PDCD2Q16342 344 aaPredicted RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 SGO1Q5FBB7 561 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 SLC25A53Q5H9E4 307 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 FBXW9Q5XUX1 488 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TTC19Q6DKK2 380 aaPredicted RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 KLHL17Q6TDP4 642 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 CBLN3Q6UW01 205 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 CDYL2Q8N8U2 506 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 GATSQ8NAP1 163 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 PYROXD1Q8WU10 500 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ATP6V1E2Q96A05 226 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 PHF21BQ96EK2 531 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 APIPQ96GX9 242 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 SH3YL1Q96HL8 342 aaPredicted RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 REXO5Q96IC2 774 aaKnown RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 AMDHD1Q96NU7 426 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TRMOQ9BU70 441 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 MYNNQ9NPC7 610 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 DDX18Q9NVP1 670 aaKnown RBP6.72□□□□□ -1.33
SMC3-202ENST00000462899 SENP1Q9P0U3 644 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 NTMQ9P121 344 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 RNF14Q9UBS8 474 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 GRID1Q9ULK0 1009 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ICAM5Q9UMF0 924 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 SNX12Q9UMY4 172 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 PPP2R2CQ9Y2T4 447 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 ZNF281Q9Y2X9 895 aa6.72□□□□□ -1.33
SMC3-202ENST00000462899 TRAF6Q9Y4K3 522 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms