RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 FLVCR1Q9Y5Y0 555 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 IKBKGQ9Y6K9 419 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 GLI2P10070 1586 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 FRMPD4Q14CM0 1322 aa2.9□□□□□ -1.95
CLK1-206ENST00000461326 IGHV3-35A0A0C4DH35 117 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 PCP4L1A6NKN8 68 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 PP2D1A8MPX8 630 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 NUDT21O43809 227 aaKnown RBP2.89□□□□□ -1.95
CLK1-206ENST00000461326 MTX2O75431 263 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 LRATO95237 230 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 HSMCR30P0CW71 290 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 ZP3P21754 424 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 IDSP22304 550 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 PTCH1Q13635 1447 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 LAGE3Q14657 143 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 SLC5A12Q1EHB4 618 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 BEND3Q5T5X7 828 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 OR5M10Q6IEU7 315 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CENPPQ6IPU0 288 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 UFSP1Q6NVU6 142 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 TTC37Q6PGP7 1564 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 KDELC1Q6UW63 502 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CD109Q6YHK3 1445 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 Q6ZPB1 254 aaPredicted RBP2.89□□□□□ -1.95
CLK1-206ENST00000461326 NLRP9Q7RTR0 991 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 KIAA1328Q86T90 577 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 P2RY8Q86VZ1 359 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 LRRC43Q8N309 656 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 GPR137CQ8N3F9 429 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 FAM133AQ8N9E0 248 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CCDC26Q8TAB7 109 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 ZNF606Q8WXB4 792 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CASKIN1Q8WXD9 1431 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 MRPS31Q92665 395 aaKnown RBP2.89□□□□□ -1.95
CLK1-206ENST00000461326 RANBP9Q96S59 729 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CCT7Q99832 543 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 C19orf24Q9BVV8 132 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 LRRC40Q9H9A6 602 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 MYO5CQ9NQX4 1742 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 UFSP2Q9NUQ7 469 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CHRNA9Q9UGM1 479 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 PCSK1NQ9UHG2 260 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 ZNF221Q9UK13 617 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 NAALAD2Q9Y3Q0 740 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 KIF14Q15058 1648 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 ABCA9Q8IUA7 1624 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 CCDC18Q5T9S5 1454 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 TEX14Q8IWB6 1497 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 FYCO1Q9BQS8 1478 aa2.89□□□□□ -1.95
CLK1-206ENST00000461326 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.88□□□□□ -1.95
CLK1-206ENST00000461326 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 DHRS7CA6NNS2 312 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 TMEM110-MUSTN1A8MSY1 372 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 ARPC3O15145 178 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 TAPBPO15533 448 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 EFNA2O43921 213 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 PGK1P00558 417 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 F10P00742 488 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 UQCRC2P22695 453 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 GATA2P23769 480 aaPredicted RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 PTBP1P26599 531 aaKnown RBP eCLIP2.88□□□□□ -1.95
CLK1-206ENST00000461326 YWHABP31946 246 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 HPCAL1P37235 193 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SSR1P43307 286 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 HNRNPA3P51991 378 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 LMO4P61968 165 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 CXCL6P80162 114 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 MAP2K1Q02750 393 aaPredicted RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 NCBP1Q09161 790 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 ASAH1Q13510 395 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SBK1Q52WX2 424 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 PAN3Q58A45 887 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 PAGE2BQ5JRK9 111 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 FAM120AOSQ5T036 256 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 UTF1Q5T230 341 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 MARC1Q5VT66 337 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 LIPNQ5VXI9 398 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 PAMR1Q6UXH9 720 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 CCDC50Q8IVM0 306 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 GPD1LQ8N335 351 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 KLHL30-AS1Q8NEE0 82 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 OR2T3Q8NH03 318 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SLC41A3Q96GZ6 507 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 COQ2Q96H96 371 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 TGM7Q96PF1 710 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 KIR2DL4Q99706 377 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SLC39A3Q9BRY0 314 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SLC35A5Q9BS91 424 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 NXF5Q9H1B4 397 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 SMYD3Q9H7B4 428 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 GORASP2Q9H8Y8 452 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 SMPD3Q9NY59 655 aaPredicted RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 APOBEC3BQ9UH17 382 aaKnown RBP2.88□□□□□ -1.95
CLK1-206ENST00000461326 PDE10AQ9Y233 779 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 CA5BQ9Y2D0 317 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 USP16Q9Y5T5 823 aa2.88□□□□□ -1.95
CLK1-206ENST00000461326 MAGI3Q5TCQ9 1506 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms