RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ZNF556Q9HAH1 456 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 TMEM27Q9HBJ8 222 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 A0A1W2PQD3 144 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 ARRDC5A6NEK1 342 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 FBXO45P0C2W1 286 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 FUT1P19526 365 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 IFNA8P32881 189 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 RAPSNQ13702 412 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 PRAMEF20Q5VT98 475 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 TMEM236Q5W0B7 351 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 UGT2A3Q6UWM9 527 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 RPS19BP1Q86WX3 136 aaKnown RBP15.38■□□□□ 0.05
NELFCD-201ENST00000460601 ACOT11Q8WXI4 607 aaPredicted RBP15.38■□□□□ 0.05
NELFCD-201ENST00000460601 SLC24A3Q9HC58 644 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 ATP13A2Q9NQ11 1180 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 ICAM5Q9UMF0 924 aa15.38■□□□□ 0.05
NELFCD-201ENST00000460601 DOCK10Q96BY6 2186 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 H3BNH8 94 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 NUDT14O95848 222 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 F10P00742 488 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ITPKBP27987 946 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 BLMHQ13867 455 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 EFR3AQ14156 821 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 NTRK2Q16620 822 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ZNF791Q3KP31 576 aaPredicted RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ZNF613Q6PF04 617 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 CCDC71Q8IV32 467 aaPredicted RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 UBE2FQ969M7 185 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 TMCO6Q96DC7 493 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 DSN1Q9H410 356 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 KLRF1Q9NZS2 232 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 KLK13Q9UKR3 277 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 POFUT2Q9Y2G5 429 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 CHCHD2Q9Y6H1 151 aaPredicted RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 EML6Q6ZMW3 1958 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 DMXL2Q8TDJ6 3036 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 H0YAE9 185 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 M0R129 80 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 CDC42EP2O14613 210 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ADAP00813 363 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 WT1P19544 449 aaPredicted RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 MYF6P23409 242 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 CD82P27701 267 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 LCN1P31025 176 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 PTGDSP41222 190 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 OMPP47874 163 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 TMED10P49755 219 aaKnown RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 MYBPC1Q00872 1141 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 RFX4Q33E94 735 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 DCAF10Q5QP82 559 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 KRT80Q6KB66 452 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ZNF555Q8NEP9 628 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 PSMF1Q92530 271 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 RELTQ969Z4 430 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 NACC2Q96BF6 587 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 C3orf49Q96BT1 292 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 THOC3Q96J01 351 aaKnown RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 GABARAPL3Q9BY60 117 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 ANKRD19PQ9H560 264 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 MEPEQ9NQ76 525 aaPredicted RBP15.37■□□□□ 0.05
NELFCD-201ENST00000460601 REV1Q9UBZ9 1251 aa15.37■□□□□ 0.05
NELFCD-201ENST00000460601 MED13Q9UHV7 2174 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 BCKDKO14874 412 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 CHP2O43745 196 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 TP53P04637 393 aaPredicted RBP15.36■□□□□ 0.05
NELFCD-201ENST00000460601 LIPCP11150 499 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 POU1F1P28069 291 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 MLF1P58340 268 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 COPZ1P61923 177 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 PSPHP78330 225 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 RPP38P78345 283 aaKnown RBP15.36■□□□□ 0.05
NELFCD-201ENST00000460601 CHAF1BQ13112 559 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 C1orf94Q6P1W5 598 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 RRM2BQ7LG56 351 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 TMEM239Q8WW34 195 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 NR4A3Q92570 626 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 GATA6Q92908 595 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 NPAS1Q99742 590 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 TRIM2Q9C040 744 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 LAT2Q9GZY6 243 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 EXOSC3Q9NQT5 275 aaKnown RBP15.36■□□□□ 0.05
NELFCD-201ENST00000460601 MGAT4BQ9UQ53 548 aa15.36■□□□□ 0.05
NELFCD-201ENST00000460601 YARS2Q9Y2Z4 477 aaKnown RBP15.36■□□□□ 0.05
NELFCD-201ENST00000460601 TRABD2BA6NFA1 517 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 CDC40O60508 579 aaKnown RBP eCLIP15.35■□□□□ 0.052e-7■■■■□ 22.9
NELFCD-201ENST00000460601 DXOO77932 396 aaKnown RBP15.35■□□□□ 0.05
NELFCD-201ENST00000460601 SLC34A2O95436 690 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 PRKAR1AP10644 381 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 ICAM2P13598 275 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 NAGAP17050 411 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 CHMP24386 653 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 ELK4P28324 431 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 GAS1P54826 345 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 ALDH6A1Q02252 535 aaKnown RBP15.35■□□□□ 0.05
NELFCD-201ENST00000460601 FOXC1Q12948 553 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 COL28A1Q2UY09 1125 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 ULK3Q6PHR2 472 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 POMZP3Q6PJE2 187 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 MBOAT2Q6ZWT7 520 aa15.35■□□□□ 0.05
NELFCD-201ENST00000460601 MDGA2Q7Z553 956 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms