RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CDX4O14627 284 aaPredicted RBP4.09□□□□□ -1.75
CCDC50-203ENST00000460064 RS1O15537 224 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 VDAC1P21796 283 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 CASQ1P31415 396 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 UGT1A3P35503 534 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 MEOX2P50222 304 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 MAP2K1Q02750 393 aaPredicted RBP4.09□□□□□ -1.75
CCDC50-203ENST00000460064 BCL2L1Q07817 233 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 CHIT1Q13231 466 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 ZNF239Q16600 458 aaKnown RBP4.09□□□□□ -1.75
CCDC50-203ENST00000460064 TP53I3Q53FA7 332 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 Q6ZR54 194 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 TPRA1Q86W33 373 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 ZBED8Q8IZ13 594 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 GPR137CQ8N3F9 429 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 OR13F1Q8NGS4 319 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 OR2A12Q8NGT7 310 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 OR1F12Q8NHA8 337 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 MRAPQ8TCY5 172 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 BADQ92934 168 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 EMG1Q92979 244 aaKnown RBP4.09□□□□□ -1.75
CCDC50-203ENST00000460064 SERAC1Q96JX3 654 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 TUBGCP2Q9BSJ2 902 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 ANP32EQ9BTT0 268 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 SPATA16Q9BXB7 569 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 RAB18Q9NP72 206 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 PIPOXQ9P0Z9 390 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 OR1A1Q9P1Q5 309 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 RABL2AQ9UBK7 228 aaPredicted RBP4.09□□□□□ -1.75
CCDC50-203ENST00000460064 PCSK1NQ9UHG2 260 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 VSIG4Q9Y279 399 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 FLVCR1Q9Y5Y0 555 aa4.09□□□□□ -1.75
CCDC50-203ENST00000460064 FAM168BA1KXE4 195 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 E7ESA3 106 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 KIF2AO00139 706 aaPredicted RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SULT2B1O00204 365 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 POLR2EP19388 210 aaKnown RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 CYP2B6P20813 491 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 LAP3P28838 519 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 GCKP35557 465 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 TNNT2P45379 298 aaPredicted RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 P2RY1P47900 373 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 P2RY4P51582 365 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SLC10A7Q0GE19 358 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 IL24Q13007 206 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 GANABQ14697 944 aaKnown RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 PRR4Q16378 134 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 UTF1Q5T230 341 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 METTL11BQ5VVY1 283 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 CENPPQ6IPU0 288 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 FAM199XQ6PEV8 388 aaPredicted RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 DNM1P46Q6ZS02 220 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 VSTM4Q8IW00 320 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 DHRSXQ8N5I4 330 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 ZNF525Q8N782 197 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 ATP6V0D2Q8N8Y2 350 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 TCTEX1D2Q8WW35 142 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 HAVCR1Q96D42 359 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SLC25A38Q96DW6 304 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 KIR2DL4Q99706 377 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 CHIAQ9BZP6 476 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 FANCFQ9NPI8 374 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 EXTL2Q9UBQ6 330 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 APOBEC3BQ9UH17 382 aaKnown RBP4.08□□□□□ -1.76
CCDC50-203ENST00000460064 KLHL21Q9UJP4 597 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 ANGPTL2Q9UKU9 493 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 CLEC4EQ9ULY5 219 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 CLEC4AQ9UMR7 237 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SCML2Q9UQR0 700 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SLCO1B1Q9Y6L6 691 aa4.08□□□□□ -1.76
CCDC50-203ENST00000460064 SMIM28A0A1B0GU29 152 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 LRP5LA4QPB2 252 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 TMEM110-MUSTN1A8MSY1 372 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 WWP2O00308 870 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 STSP08842 583 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 GIG44P09565 113 aaPredicted RBP4.07□□□□□ -1.76
CCDC50-203ENST00000460064 PNMTP11086 282 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 GCFC2P16383 781 aaKnown RBP4.07□□□□□ -1.76
CCDC50-203ENST00000460064 HOXD10P28358 340 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 HSPA2P54652 639 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 AIF1P55008 147 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 UBE2HP62256 183 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 PDK3Q15120 406 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 HSP90AB3PQ58FF7 597 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 OR2B11Q5JQS5 317 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 LIPNQ5VXI9 398 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 SPINK14Q6IE38 97 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 FRA10AC1Q70Z53 315 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 CCDC80Q76M96 950 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 TRPM8Q7Z2W7 1104 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 ZNF677Q86XU0 584 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 UBQLNLQ8IYU4 475 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 CLEC4FQ8N1N0 589 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 ZCCHC7Q8N3Z6 543 aaKnown RBP4.07□□□□□ -1.76
CCDC50-203ENST00000460064 ZPLD1Q8TCW7 415 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 MAIP1Q8WWC4 291 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 PIGCQ92535 297 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 FAF2Q96CS3 445 aa4.07□□□□□ -1.76
CCDC50-203ENST00000460064 RHBGQ9H310 441 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms