RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 NIPSNAP3BQ9BS92 247 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 BABAM2Q9NXR7 383 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 OBP2AQ9NY56 170 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 ABI3Q9P2A4 366 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SCML1Q9UN30 329 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 TET1Q8NFU7 2136 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 F11P03951 625 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 TCRBP04435 133 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 CAPNS1P04632 268 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 ELK1P19419 428 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SCAPQ12770 1279 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 RGNQ15493 299 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 ZNF574Q6ZN55 896 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 LIX1LQ8IVB5 337 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 OR4K14Q8NGD5 310 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 GPR150Q8NGU9 434 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 OR52P1PQ8NH57 321 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SYNPRQ8TBG9 265 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 MITD1Q8WV92 249 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 DUS3LQ96G46 650 aaKnown RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 ZNF629Q9UEG4 869 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 FCF1Q9Y324 198 aaKnown RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 WNT6Q9Y6F9 365 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 A0A0A6YYH2 397 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 A6NJ64 397 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 LILRB5O75023 590 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 KIAA0141Q14154 515 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 ALKAL2Q6UX46 152 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 LARP4Q71RC2 724 aaKnown RBP eCLIP9.17□□□□□ -0.94
UFD1-205ENST00000459854 LRRTM4Q86VH4 590 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLC35F2Q8IXU6 374 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 C1orf87Q8N0U7 546 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 KCNRGQ8N5I3 272 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLC25A21Q9BQT8 299 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 NMNAT2Q9BZQ4 307 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 RAB9BQ9NP90 201 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLAMF7Q9NQ25 335 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 MAN2C1Q9NTJ4 1040 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 GIMAP2Q9UG22 337 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 C7orf72A4D263 438 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 GPR89AB7ZAQ6 455 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 BLOC1S5-TXNDC5H3BN57 136 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 LILRB3O75022 631 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 GPR89BP0CG08 455 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 TAS2R46P59540 309 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 MFSD13AQ14CX5 517 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 ACSM3Q53FZ2 586 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 GDPD4Q6W3E5 623 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 C6orf120Q7Z4R8 191 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SCD5Q86SK9 330 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.17□□□□□ -0.94
UFD1-205ENST00000459854 OR4M1Q8NGD0 313 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 OR2A12Q8NGT7 310 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 ZCCHC10Q8TBK6 192 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SLC25A44Q96H78 314 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 SEMA4GQ9NTN9 838 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 MRPL15Q9P015 296 aaKnown RBP9.17□□□□□ -0.94
UFD1-205ENST00000459854 GNG13Q9P2W3 67 aa9.17□□□□□ -0.94
UFD1-205ENST00000459854 SAP18O00422 153 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 PDZK1IP1Q13113 114 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 GPR139Q6DWJ6 353 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 BEND4Q6ZU67 534 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 PTRH1Q86Y79 214 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 KRTCAP2Q8N6L1 136 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ADAMTS18Q8TE60 1221 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 GAL3ST4Q96RP7 486 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 OCSTAMPQ9BR26 566 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 CRB3Q9BUF7 120 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 SMG9Q9H0W8 520 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 IL21RQ9HBE5 538 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 KLHL13Q9P2N7 655 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 TRIOBPQ9H2D6 2365 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 SMLR1H3BR10 107 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 CTDSP2O14595 271 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 PNPP00491 289 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 P2RX3P56373 397 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 CSNK2A1P68400 391 aaPredicted RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 SCGB2A2Q13296 93 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 RIN1Q13671 783 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 AMZ1Q400G9 498 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 FAM162BQ5T6X4 162 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 PDZD3Q86UT5 571 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 FAM129CQ86XR2 697 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 ZNF695Q8IW36 515 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 GPR26Q8NDV2 337 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 CSNK2A3Q8NEV1 391 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 OR52H1Q8NGJ2 320 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 OR10Z1Q8NGY1 313 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 RPL3LQ92901 407 aaKnown RBP9.16□□□□□ -0.94
UFD1-205ENST00000459854 SLC46A2Q9BY10 475 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 HOXD1Q9GZZ0 328 aa9.16□□□□□ -0.94
UFD1-205ENST00000459854 RASD1Q9Y272 281 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms