RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PSKH1P11801 424 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PRG2P13727 222 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 HOXB3P14651 431 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 TBXA2RP21731 343 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 LCN1P31025 176 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 MAT2AP31153 395 aaKnown RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PITPNBP48739 271 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CCR5P51681 352 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SEC13P55735 322 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ARF3P61204 181 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 MAB21L1Q13394 359 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF141Q15928 474 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 TATDN3Q17R31 274 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 FCRL6Q6DN72 434 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SPATC1Q76KD6 591 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 VASH1Q7L8A9 365 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 NUP54Q7Z3B4 507 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 OAFQ86UD1 273 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 GATAD2AQ86YP4 633 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 FAM20CQ8IXL6 584 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF595Q8IYB9 648 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 EID2Q8N6I1 236 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SIRT6Q8N6T7 355 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SLC37A3Q8NCC5 494 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 OR10G6Q8NH81 332 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 LILRB4Q8NHJ6 448 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 UBASH3BQ8TF42 649 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ZG16BQ96DA0 208 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 MRPL38Q96DV4 380 aaKnown RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 NEDD4LQ96PU5 975 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 CNN2Q99439 309 aaKnown RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 TEAD3Q99594 435 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 NRTNQ99748 197 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 GTPBP2Q9BX10 602 aaKnown RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 HDHD5Q9BXW7 423 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PLA2G2FQ9BZM2 168 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 ACTR6Q9GZN1 396 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 HDHD2Q9H0R4 259 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SEMA6CQ9H3T2 930 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 Q9N2J8 555 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 EXTL2Q9UBQ6 330 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 YARS2Q9Y2Z4 477 aaKnown RBP8.19□□□□□ -1.1
HDAC3-202ENST00000459727 SLC6A5Q9Y345 797 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 PLEKHM1Q9Y4G2 1056 aa8.19□□□□□ -1.1
HDAC3-202ENST00000459727 COL4A2P08572 1712 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 TTC28Q96AY4 2481 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 A0A1W2PQF6 199 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CD8B2A6NJW9 211 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 HSPB2A8KAH6 182 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 NOTOA8MTQ0 251 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ARPC3O15145 178 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PLA2G10O15496 165 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 P2RX6O15547 441 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF749O43361 778 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SCO2O43819 266 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 FGF17O60258 216 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SRPX2O60687 465 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CTSVO60911 334 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 UBL3O95164 117 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 APOL3O95236 402 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 LYPD3O95274 346 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZGLP1P0C6A0 271 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CD8BP10966 210 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RNH1P13489 461 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 APEHP13798 732 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 POLR2CP19387 275 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ALAS2P22557 587 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SLC2A5P22732 501 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 HTR2AP28223 471 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CTHP32929 405 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 GABRA3P34903 492 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SOX18P35713 384 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 AP3S2P59780 193 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PRPS1P60891 318 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RRAS2P62070 204 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PPP2CBP62714 309 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 UBE2IP63279 158 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 PPP2CAP67775 309 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 MRPS10P82664 201 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 LSM11P83369 360 aaKnown RBP eCLIP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CSTF1Q05048 431 aaKnown RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 GPR18Q14330 331 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 RAB30Q15771 203 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 HSPB2Q16082 182 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 MAPK14Q16539 360 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 CARTPTQ16568 116 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ALG11Q2TAA5 492 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 KLHL12Q53G59 568 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ALG10BQ5I7T1 473 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 IDNKQ5T6J7 187 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SLC22A10Q63ZE4 541 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF57Q68EA5 555 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 DMKNQ6E0U4 476 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SFXN4Q6P4A7 337 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 DPY19L2P2Q6ZN68 376 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 TMEM91Q6ZNR0 172 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
HDAC3-202ENST00000459727 SHFQ7M4L6 423 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms