RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ANGPTL1O95841 491 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 TP53P04637 393 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 CELA2AP08217 269 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 NOVA1P51513 510 aaKnown RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 CCR4P51679 360 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 PTGES3Q15185 160 aaKnown RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 CTU2Q2VPK5 515 aaKnown RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 WBP2NLQ6ICG8 309 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 CCDC71Q8IV32 467 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 RNF138Q8WVD3 245 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 HDAC2Q92769 488 aaKnown RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 RASL10BQ96S79 203 aa22.35■■□□□ 1.17
U2AF1-204ENST00000459639 CCNL2Q96S94 520 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-204ENST00000459639 HCRTR2O43614 444 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 OR6B1O95007 311 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 ICAM2P13598 275 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 ELK4P28324 431 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 LINC00114Q6XXX2 140 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 DEPDC4Q8N2C3 294 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 GALNT15Q8N3T1 639 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 NODALQ96S42 347 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 PHOX2BQ99453 314 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 BATF3Q9NR55 127 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 CNIH4Q9P003 139 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 TMEM5Q9Y2B1 443 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 MED31Q9Y3C7 131 aa22.34■■□□□ 1.17
U2AF1-204ENST00000459639 SCO2O43819 266 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 SOX14O95416 240 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 SMIM18P0DKX4 95 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 F8A1P23610 371 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 RBMS1P29558 406 aaKnown RBP22.33■■□□□ 1.17
U2AF1-204ENST00000459639 PRKCDQ05655 676 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 MAD2L1BPQ15013 274 aaPredicted RBP22.33■■□□□ 1.17
U2AF1-204ENST00000459639 MEP1AQ16819 746 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 RBM48Q5RL73 367 aaKnown RBP22.33■■□□□ 1.17
U2AF1-204ENST00000459639 C6orf141Q5SZD1 244 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 RASSF6Q6ZTQ3 369 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 ADAMTS14Q8WXS8 1223 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 FBXL4Q9UKA2 621 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 CUL9Q8IWT3 2517 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 ZNF292O60281 2723 aa22.33■■□□□ 1.17
U2AF1-204ENST00000459639 LOC101059948A0A1B0GTJ6 334 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 TRIM64A6NGJ6 449 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 CDRT15L2A8MXV6 281 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 H3BN98 237 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 ADAM10O14672 748 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 CTBP2P56545 445 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 CDK5R2Q13319 367 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 NTRK2Q16620 822 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 RAB43Q86YS6 212 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 ARMC10Q8N2F6 343 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 OR5M3Q8NGP4 307 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 FAM81AQ8TBF8 368 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 C3orf49Q96BT1 292 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 SPACA9Q96E40 222 aaPredicted RBP22.33■■□□□ 1.16
U2AF1-204ENST00000459639 ICAM5Q9UMF0 924 aa22.33■■□□□ 1.16
U2AF1-204ENST00000459639 ITGA10O75578 1167 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 POU1F1P28069 291 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 GPR4P46093 362 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 IDH2P48735 452 aaKnown RBP22.32■■□□□ 1.16
U2AF1-204ENST00000459639 TOP3AQ13472 1001 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-204ENST00000459639 MRGPREQ86SM8 312 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 MARCH9Q86YJ5 346 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 ENTHD1Q8IYW4 607 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 SH3YL1Q96HL8 342 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-204ENST00000459639 MRPS26Q9BYN8 205 aaKnown RBP22.32■■□□□ 1.16
U2AF1-204ENST00000459639 P4HTMQ9NXG6 502 aa22.32■■□□□ 1.16
U2AF1-204ENST00000459639 YARS2Q9Y2Z4 477 aaKnown RBP22.32■■□□□ 1.16
U2AF1-204ENST00000459639 PCSK5Q92824 1860 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 A0A087WUJ7 227 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 P2RX1P51575 399 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 CDC42P60953 191 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 CHAF1BQ13112 559 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 IL10RAQ13651 578 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 APOFQ13790 326 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 SLX4IPQ5VYV7 408 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 LAIR2Q6ISS4 152 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 IGF2-ASQ6U949 168 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 MEX3DQ86XN8 651 aaKnown RBP22.31■■□□□ 1.16
U2AF1-204ENST00000459639 TSPAN14Q8NG11 270 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 OR5W2Q8NH69 310 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 PFN4Q8NHR9 129 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 CNIH3Q8TBE1 160 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 ZNF566Q969W8 418 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 RNF6Q9Y252 685 aa22.31■■□□□ 1.16
U2AF1-204ENST00000459639 PNMTP11086 282 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 IFI30P13284 250 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 PGCP20142 388 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 ZNF791Q3KP31 576 aaPredicted RBP22.3■■□□□ 1.16
U2AF1-204ENST00000459639 OPN5Q6U736 354 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 TMPRSS11FQ6ZWK6 438 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 KIF18BQ86Y91 864 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 DND1Q8IYX4 353 aaKnown RBP22.3■■□□□ 1.16
U2AF1-204ENST00000459639 CDK20Q8IZL9 346 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 CLDN22Q8N7P3 220 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 ZNF563Q8TA94 476 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 NKD1Q969G9 470 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 C12orf10Q9HB07 376 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 IMPAD1Q9NX62 359 aa22.3■■□□□ 1.16
U2AF1-204ENST00000459639 SLC30A4O14863 429 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms