RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 COMMD6Q7Z4G1 85 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 C1orf87Q8N0U7 546 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 WFIKKN2Q8TEU8 576 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PCNPQ8WW12 178 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 G6PC3Q9BUM1 346 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 OR2AG1Q9H205 316 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SYNPO2LQ9H987 977 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PELI2Q9HAT8 420 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SLAMF7Q9NQ25 335 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 MUTYHQ9UIF7 546 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 V9GYS6 101 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 N4BP2Q86UW6 1770 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 C17orf113A0A1B0GUU1 675 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 A0A1W2PPK0 400 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ARL5CA6NH57 179 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 A8MXE2 369 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TMX2-CTNND1H3BSU7 103 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 K7EPK0 472 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SLC33A1O00400 549 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 BCL2L11O43521 198 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 CLDN7O95471 211 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ITGA5P08648 1049 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 CLEC2LP0C7M8 214 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PRDX3P30048 256 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 NAA10P41227 235 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 MMP15P51511 669 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF140P52738 457 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 EPHA5P54756 1037 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 EPHA4P54764 986 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 CDK3Q00526 305 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TLE4Q04727 773 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SPOCK1Q08629 439 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 FAM182BQ5T319 152 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SLC18B1Q6NT16 456 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ADAM5Q6NVV9 412 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 NIPAL3Q6P499 406 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 WDR88Q6ZMY6 472 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SLC29A4Q7RTT9 530 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 FAM71E2Q8N5Q1 922 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 OR4K14Q8NGD5 310 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 OR1J1Q8NGS3 322 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 FBXW5Q969U6 566 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 NUDT16L1Q9BRJ7 211 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ACTRT3Q9BYD9 372 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TUBG2Q9NRH3 451 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 RNF19AQ9NV58 838 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF225Q9UK10 706 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 DNMT3AQ9Y6K1 912 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 BAZ2AQ9UIF9 1905 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TBC1D3KA0A087X1G2 549 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 IGKV6D-21A0A0A0MT36 114 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TBC1D3BA6NDS4 549 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TBC1D3FA6NER0 549 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 NFKBIEO00221 500 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 AGPAT2O15120 278 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 SMAD9O15198 467 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 JTBO76095 146 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ATG12O94817 140 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 DIRAS3O95661 229 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TFPIP10646 304 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 IMPA1P29218 277 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 GPR4P46093 362 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 RAP1AP62834 184 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 HSD11B2P80365 405 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PIN1Q13526 163 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ELFN2Q5R3F8 820 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PRAMEF8Q5VWM4 474 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 PRAMEF7Q5VXH5 474 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TBC1D3GQ6DHY5 549 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 STEAP1BQ6NZ63 245 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 FCRLAQ7L513 359 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TRAM1L1Q8N609 369 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 L3MBTL4Q8NA19 623 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ACVR1CQ8NER5 493 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 LPPQ93052 612 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 C4orf36Q96KX1 117 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 LRFN5Q96NI6 719 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TGM7Q96PF1 710 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 RBP7Q96R05 134 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 CYSLTR2Q9NS75 346 aa4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ZNF275Q9NSD4 429 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 RYDENQ9NUL5 291 aaKnown RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 ELF5Q9UKW6 265 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 COL2A1P02458 1487 aaPredicted RBP4.7□□□□□ -1.66
PCDH9-203ENST00000456367 TBC1D3EA0A087X179 549 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 A0A1B0GVT2 93 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SOWAHBA6NEL2 793 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 OR5K3A6NET4 321 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 GABRR3A8MPY1 467 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 TARM1B6A8C7 271 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 RAD51DO75771 328 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CELF2O95319 508 aaKnown RBP4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 MAS1P04201 325 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CPN1P15169 458 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 SLC19A1P41440 591 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 XCR1P46094 333 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CCR6P51684 374 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 CLCNKAP51800 687 aa4.69□□□□□ -1.66
PCDH9-203ENST00000456367 PGGT1BP53609 377 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms