RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 CHMP6Q96FZ7 201 aa14.24□□□□□ -0.13
GPC1-206ENST00000455111 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
GPC1-206ENST00000455111 ZNF300Q96RE9 604 aaPredicted RBP14.24□□□□□ -0.13
GPC1-206ENST00000455111 MDFIQ99750 246 aa14.24□□□□□ -0.13
GPC1-206ENST00000455111 DTNAQ9Y4J8 743 aa14.24□□□□□ -0.13
GPC1-206ENST00000455111 DPRXA6NFQ7 191 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 TMEM114B3SHH9 223 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 C9JVG2 144 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 INAFM1C9JVW0 142 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 OVOL3O00110 214 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 UGT2B17O75795 530 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 HSPA4LO95757 839 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 ADAP00813 363 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 HPGDP15428 266 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 PCSK6P29122 969 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 NTF4P34130 210 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 EIF1P41567 113 aaKnown RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 OR4F3Q6IEY1 312 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 ADAM5Q6NVV9 412 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 RFWD2Q8NHY2 731 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 AENQ8WTP8 325 aaKnown RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 CPNE4Q96A23 557 aaPredicted RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 ZNF775Q96BV0 537 aaPredicted RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 DUSP26Q9BV47 211 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 BHLHE41Q9C0J9 482 aaPredicted RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 GPC6Q9Y625 555 aaPredicted RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 ABCA2Q9BZC7 2435 aa14.23□□□□□ -0.13
GPC1-206ENST00000455111 FBN1P35555 2871 aaKnown RBP14.23□□□□□ -0.13
GPC1-206ENST00000455111 ANKRD28O15084 1053 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
GPC1-206ENST00000455111 CLDN8P56748 225 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 TNK1Q13470 666 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 ZNF141Q15928 474 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 ATP6AP1LQ52LC2 224 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 HEPHL1Q6MZM0 1159 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 C6orf120Q7Z4R8 191 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 HMGN2P46Q86SG4 172 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 RIBC1Q8N443 379 aaPredicted RBP14.22□□□□□ -0.13
GPC1-206ENST00000455111 ZNF781Q8N8C0 355 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 MAPK1IP1LQ8NDC0 245 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 OR5W2Q8NH69 310 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 ZG16BQ96DA0 208 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 SORT1Q99523 831 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 BDH2Q9BUT1 245 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 THUMPD3Q9BV44 507 aaKnown RBP14.22□□□□□ -0.13
GPC1-206ENST00000455111 HOXD1Q9GZZ0 328 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 IQCGQ9H095 443 aaKnown RBP14.22□□□□□ -0.13
GPC1-206ENST00000455111 BCO1Q9HAY6 547 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 ASIC5Q9NY37 505 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 NPAP1Q9NZP6 1156 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 MKLN1Q9UL63 735 aa14.22□□□□□ -0.13
GPC1-206ENST00000455111 SERINC4A6NH21 518 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ZNF264O43296 627 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 NDUFS7O75251 213 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 PRKD3O94806 890 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 NUDT14O95848 222 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 YES1P07947 543 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 PRPS1L1P21108 318 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ATP6V1C1P21283 382 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ME2P23368 584 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 MAPK1P28482 360 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 RPL3P39023 403 aaKnown RBP14.21□□□□□ -0.13
GPC1-206ENST00000455111 EMX2Q04743 252 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 SELENBP1Q13228 472 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 MPP2Q14168 576 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 RNPS1Q15287 305 aaKnown RBP14.21□□□□□ -0.13
GPC1-206ENST00000455111 GPR68Q15743 365 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 PGGHGQ32M88 737 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 TYW3Q6IPR3 259 aaKnown RBP14.21□□□□□ -0.13
GPC1-206ENST00000455111 ALKBH2Q6NS38 261 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ZNF614Q8N883 585 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ZNF527Q8NB42 609 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 FAM71CQ8NEG0 241 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 KBTBD8Q8NFY9 601 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.21□□□□□ -0.13
GPC1-206ENST00000455111 TUBGCP3Q96CW5 907 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 MRGPRX4Q96LA9 322 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 PPP1R36Q96LQ0 422 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 NMUR2Q9GZQ4 415 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 ZNF350Q9GZX5 532 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 AKTIPQ9H8T0 292 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 EML4Q9HC35 981 aaKnown RBP14.21□□□□□ -0.13
GPC1-206ENST00000455111 STOML1Q9UBI4 398 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 FAF1Q9UNN5 650 aaPredicted RBP14.21□□□□□ -0.13
GPC1-206ENST00000455111 LAMP3Q9UQV4 416 aa14.21□□□□□ -0.13
GPC1-206ENST00000455111 CLDN24A6NM45 220 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 EIF4E2O60573 245 aaKnown RBP14.2□□□□□ -0.14
GPC1-206ENST00000455111 CYTIPO60759 359 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 RAMP1O60894 148 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 CD8AP01732 235 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 UBL4AP11441 157 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 MATN1P21941 496 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 IGHV1-2P23083 117 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 PGM1P36871 562 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 SERPINB5P36952 375 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 CDKN1AP38936 164 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 OR3A2P47893 321 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 FOXG1P55316 489 aaPredicted RBP14.2□□□□□ -0.14
GPC1-206ENST00000455111 RAC3P60763 192 aa14.2□□□□□ -0.14
GPC1-206ENST00000455111 ARHGAP11BQ3KRB8 267 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms