RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SLC29A1Q99808 456 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 ANGPTL4Q9BY76 406 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 LAT2Q9GZY6 243 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 METTL7AQ9H8H3 244 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 TRIM45Q9H8W5 580 aaPredicted RBP10.01□□□□□ -0.81
SCN9A-205ENST00000454569 KLRF1Q9NZS2 232 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 DNAJB9Q9UBS3 223 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 FBXL2Q9UKC9 423 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 ACAD8Q9UKU7 415 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 SLC9A8Q9Y2E8 581 aa10.01□□□□□ -0.81
SCN9A-205ENST00000454569 MAP1BP46821 2468 aaKnown RBP10□□□□□ -0.81
SCN9A-205ENST00000454569 NBEAQ8NFP9 2946 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 TRBV4-1A0A0J9YWV2 114 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 SAC3D1A6NKF1 404 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 SHISA8B8ZZ34 492 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 GNB5O14775 395 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 HCRTR2O43614 444 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 CDC40O60508 579 aaKnown RBP eCLIP10□□□□□ -0.81
SCN9A-205ENST00000454569 RHCEP18577 417 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 LIMS1P48059 325 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 CYB561P49447 251 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 CCR4P51679 360 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 CDH12P55289 794 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 FOXK2Q01167 660 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 MFAP5Q13361 173 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 SEC23BQ15437 767 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 OR1C1Q15619 314 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 COL28A1Q2UY09 1125 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 EIPR1Q53HC9 387 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 RTL4Q6ZR62 310 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 GDF7Q7Z4P5 450 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 MEX3DQ86XN8 651 aaKnown RBP10□□□□□ -0.81
SCN9A-205ENST00000454569 CMIPQ8IY22 773 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 PSD4Q8NDX1 1056 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 MDS2Q8NDY4 140 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 ADAMTS16Q8TE57 1224 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 FRMD6Q96NE9 622 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 PIP5K1AQ99755 562 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 CIB1Q99828 191 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 PRSS27Q9BQR3 290 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 FUZQ9BT04 418 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 OSBPL11Q9BXB4 747 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 TSPAN10Q9H1Z9 355 aaPredicted RBP10□□□□□ -0.81
SCN9A-205ENST00000454569 DSN1Q9H410 356 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 NMNAT1Q9HAN9 279 aaPredicted RBP10□□□□□ -0.81
SCN9A-205ENST00000454569 KLHL1Q9NR64 748 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 KLHL28Q9NXS3 571 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 SLC13A4Q9UKG4 626 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 SLC35A3Q9Y2D2 325 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 WIF1Q9Y5W5 379 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 LYVE1Q9Y5Y7 322 aa10□□□□□ -0.81
SCN9A-205ENST00000454569 A0A1B0GWA3 101 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 TP53I11O14683 189 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 RRP8O43159 456 aaKnown RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 LDLRP01130 860 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 RFPL3SP0C7P2 107 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 TCEA1P23193 301 aaKnown RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 IDH2P48735 452 aaKnown RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 SPIBQ01892 262 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 EXOC3L2Q2M3D2 409 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 OGFRL1Q5TC84 451 aaPredicted RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 TMEM81Q6P7N7 255 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 IGFL2Q6UWQ7 119 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 ARSKQ6UWY0 536 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 P3H2Q8IVL5 708 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 CADM2Q8N3J6 435 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 TMCO5AQ8N6Q1 288 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 PIK3C3Q8NEB9 887 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 OR2M3Q8NG83 312 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 B4GALNT2Q8NHY0 566 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 GPR119Q8TDV5 335 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 RELTQ969Z4 430 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 CENPNQ96H22 339 aaPredicted RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 DHRS1Q96LJ7 313 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 PRRC1Q96M27 445 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 GNRHR2Q96P88 292 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 UTP23Q9BRU9 249 aaKnown RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 KLHL4Q9C0H6 718 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 YY1AP1Q9H869 796 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 CACYBPQ9HB71 228 aaKnown RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 TUBA8Q9NY65 449 aaPredicted RBP9.99□□□□□ -0.81
SCN9A-205ENST00000454569 OAZ3Q9UMX2 235 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 C15orf41Q9Y2V0 281 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 KIAA1549Q9HCM3 1950 aa9.99□□□□□ -0.81
SCN9A-205ENST00000454569 A0A087WV48 116 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 OR5H15A6NDH6 313 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 SOCS2O14508 198 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 GNGT2O14610 69 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 EFNA2O43921 213 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 EIF4E2O60573 245 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 TRIM3O75382 744 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 DEAF1O75398 565 aaPredicted RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 LINGO3P0C6S8 592 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 HOXB6P17509 224 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 ELAVL4P26378 380 aaKnown RBP9.98□□□□□ -0.81
SCN9A-205ENST00000454569 RFC3P40938 356 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 P2RX1P51575 399 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 HMGA2P52926 109 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 C17orf67Q0P5P2 114 aa9.98□□□□□ -0.81
SCN9A-205ENST00000454569 FOXO1Q12778 655 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms