RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF350Q9GZX5 532 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 LAT2Q9GZY6 243 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 CXXC4Q9H2H0 198 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 PLEKHF2Q9H8W4 249 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 AIG1Q9NVV5 245 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 C6orf203Q9P0P8 240 aaPredicted RBP13.67□□□□□ -0.22
CHD3-205ENST00000449744 WDR45Q9Y484 360 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 MED13LQ71F56 2210 aa13.67□□□□□ -0.22
CHD3-205ENST00000449744 AKAP6Q13023 2319 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 GOLGA8QA0A0J9YX86 632 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 GOLGA8OA6NCC3 632 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 GOLGA8NF8WBI6 632 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 UGT2B17O75795 530 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 ALDOCP09972 364 aaKnown RBP13.66□□□□□ -0.22
CHD3-205ENST00000449744 EPHA3P29320 983 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 SHC1P29353 583 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 SLC7A1P30825 629 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 SLC18A1P54219 525 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 UFM1P61960 85 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 PPP2R2AP63151 447 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 GPAT3Q53EU6 434 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 TMEM201Q5SNT2 666 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 ANKRD34AQ69YU3 496 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 NXNQ6DKJ4 435 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 HEPHL1Q6MZM0 1159 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 BEND4Q6ZU67 534 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 EIF3MQ7L2H7 374 aaKnown RBP13.66□□□□□ -0.22
CHD3-205ENST00000449744 OLIG3Q7RTU3 272 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 RAB3IL1Q8TBN0 382 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 ZFP90Q8TF47 636 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 MBD6Q96DN6 1003 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 ALPK1Q96QP1 1244 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
CHD3-205ENST00000449744 WDR55Q9H6Y2 383 aaPredicted RBP13.66□□□□□ -0.22
CHD3-205ENST00000449744 MANSC1Q9H8J5 431 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 POLE3Q9NRF9 147 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 BTNL2Q9UIR0 455 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 MTORP42345 2549 aa13.66□□□□□ -0.22
CHD3-205ENST00000449744 SETD2Q9BYW2 2564 aaPredicted RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 EFNA2O43921 213 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 SNNO75324 88 aaPredicted RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 ATE1O95260 518 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 UBTFL6P0CB48 400 aaPredicted RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 CD99P14209 185 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 PGCP20142 388 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 CRYGSP22914 178 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 CCKARP32238 428 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 ANXA11P50995 505 aaKnown RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 LRRC74AQ0VAA2 488 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 ZNF239Q16600 458 aaKnown RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 DEFB113Q30KQ7 82 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 SLC25A53Q5H9E4 307 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 TYW3Q6IPR3 259 aaKnown RBP13.65□□□□□ -0.22
CHD3-205ENST00000449744 ZNF619Q8N2I2 560 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 RNF128Q8TEB7 428 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 OIT3Q8WWZ8 545 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 PIK3IP1Q96FE7 263 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 CCDC115Q96NT0 180 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 SRXN1Q9BYN0 137 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 C12orf49Q9H741 205 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 TMBIM4Q9HC24 238 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 SERINC1Q9NRX5 453 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 KCNE5Q9UJ90 142 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 SLC35A3Q9Y2D2 325 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 CELSR1Q9NYQ6 3014 aa13.65□□□□□ -0.22
CHD3-205ENST00000449744 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 CCDC154A6NI56 674 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 C9JVG2 144 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 KIAA0513O60268 411 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 PRKD3O94806 890 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 PGRP06401 933 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 GUSBP08236 651 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 PPP3CBP16298 524 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 AGTR1P30556 359 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 SKP2Q13309 424 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 TIGD2Q4W5G0 525 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 BEND6Q5SZJ8 279 aaPredicted RBP13.64□□□□□ -0.23
CHD3-205ENST00000449744 C3orf33Q6P1S2 294 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 ZNF621Q6ZSS3 439 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 FCRLAQ7L513 359 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 TGIF2LYQ8IUE0 185 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
CHD3-205ENST00000449744 ZNF563Q8TA94 476 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 ABHD3Q8WU67 409 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 ST8SIA1Q92185 356 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 TLCD1Q96CP7 247 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 GPR45Q9Y5Y3 372 aa13.64□□□□□ -0.23
CHD3-205ENST00000449744 A0A1W2PPR1 153 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 DEFB108AA8MXU0 73 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 NTN1O95631 604 aa13.63□□□□□ -0.23
CHD3-205ENST00000449744 IDO1P14902 403 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms