RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SLC34A1Q06495 639 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 TRIP10Q15642 601 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 TBR1Q16650 682 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 ZNF605Q86T29 641 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 OFCC1Q8IZS5 231 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 WDSUB1Q8N9V3 476 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 CATSPER1Q8NEC5 780 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 OR5W2Q8NH69 310 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 HAS2Q92819 552 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 ZNF597Q96LX8 424 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 SMAD5Q99717 465 aaKnown RBP13.33□□□□□ -0.28
TNF-208ENST00000449264 TRIM2Q9C040 744 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 NMNAT1Q9HAN9 279 aaPredicted RBP13.33□□□□□ -0.28
TNF-208ENST00000449264 FBXL2Q9UKC9 423 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 VDAC3Q9Y277 283 aa13.33□□□□□ -0.28
TNF-208ENST00000449264 PIEZO2Q9H5I5 2752 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 A0A1B0GWA3 101 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 TMEM8BA6NDV4 472 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 ANKUB1A6NFN9 424 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 MKRN2OSH3BPM6 223 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 TNFRSF11BO00300 401 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 SNPHO15079 494 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 SNX4O95219 450 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 OR5F1O95221 314 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 GADD45GO95257 159 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 H1F0P07305 194 aaKnown RBP13.32□□□□□ -0.28
TNF-208ENST00000449264 CD46P15529 392 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 ZNF23P17027 643 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 PGCP20142 388 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 PTNP21246 168 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 TCEA1P23193 301 aaKnown RBP13.32□□□□□ -0.28
TNF-208ENST00000449264 CD97P48960 835 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 LAPTM4AQ15012 233 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 TOMM34Q15785 309 aaPredicted RBP13.32□□□□□ -0.28
TNF-208ENST00000449264 IGFL2Q6UWQ7 119 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 GALNTL5Q7Z4T8 443 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 OR1J4Q8NGS1 313 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 SLC41A3Q96GZ6 507 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 FRMD6Q96NE9 622 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 NTN4Q9HB63 628 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 ACAD8Q9UKU7 415 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 SLC7A7Q9UM01 511 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 PCDHGA9Q9Y5G4 932 aaKnown RBP13.32□□□□□ -0.28
TNF-208ENST00000449264 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 MPDZO75970 2070 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 FREM3P0C091 2139 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 ATMQ13315 3056 aa13.32□□□□□ -0.28
TNF-208ENST00000449264 IGLV3-32A0A0A0MS00 114 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TRAPPC13A5PLN9 417 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 PINLYPA6NC86 204 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 CDK2AP1O14519 115 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 NME2P1O60361 137 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 SP1P08047 785 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 CNR1P21554 472 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 NME2P22392 152 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 PEX2P28328 305 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 MSX1P28360 303 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TNFSF10P50591 281 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 SUMO3P55854 103 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 ST3GAL3Q11203 375 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 QPRTQ15274 297 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 EXOC3L2Q2M3D2 409 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ZNF766Q5HY98 468 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 COLEC12Q5KU26 742 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 SLC25A25Q6KCM7 469 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ARSKQ6UWY0 536 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 GDF7Q7Z4P5 450 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 PLCZ1Q86YW0 608 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 OR2M3Q8NG83 312 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 GPR119Q8TDV5 335 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TM9SF4Q92544 642 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ZNF524Q96C55 264 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 CRELD1Q96HD1 420 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TMEM41AQ96HV5 264 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 GNRHR2Q96P88 292 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TUBA8Q9NY65 449 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 TAS2R10Q9NYW0 307 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 SELENONQ9NZV5 590 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 OAZ3Q9UMX2 235 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 KLF13Q9Y2Y9 288 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 MAP1BP46821 2468 aaKnown RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 BOD1L1Q8NFC6 3051 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 A0A0B4J2E0 115 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TRBV4-1A0A0J9YWV2 114 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 A0A1B0GX12 115 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TRIM3O75382 744 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 NTN1O95631 604 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 THY1P04216 161 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 MST1P26927 711 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 RFC3P40938 356 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ZNF41P51814 821 aaPredicted RBP13.31□□□□□ -0.28
TNF-208ENST00000449264 SNCBQ16143 134 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ALG10BQ5I7T1 473 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 TIGD3Q6B0B8 471 aa13.31□□□□□ -0.28
TNF-208ENST00000449264 ZNF613Q6PF04 617 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms