RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 FMO6PO60774 539 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 ANXA8P13928 327 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 NAGAP17050 411 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 PTGDSP41222 190 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 GSSP48637 474 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 SSR4P51571 173 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 MED21Q13503 144 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 KLHL17Q6TDP4 642 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 NUP54Q7Z3B4 507 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 LAT2Q9GZY6 243 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 CNIH4Q9P003 139 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 ICAM5Q9UMF0 924 aa22.72■■□□□ 1.23
RFFL-206ENST00000447669 IFNA8P32881 189 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 CAPGP40121 348 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 GAS1P54826 345 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 UGT2B15P54855 530 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 ALG10BQ5I7T1 473 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 CHERPQ8IWX8 916 aaKnown RBP22.71■■□□□ 1.23
RFFL-206ENST00000447669 NRMQ8IXM6 262 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 TMEM156Q8N614 296 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 LSMEM1Q8N8F7 131 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 FAM46AQ96IP4 442 aaKnown RBP22.71■■□□□ 1.23
RFFL-206ENST00000447669 TRIM2Q9C040 744 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 PAPOLBQ9NRJ5 636 aaKnown RBP22.71■■□□□ 1.23
RFFL-206ENST00000447669 ORC6Q9Y5N6 252 aa22.71■■□□□ 1.23
RFFL-206ENST00000447669 CHCHD2Q9Y6H1 151 aaPredicted RBP22.71■■□□□ 1.23
RFFL-206ENST00000447669 G3V3Y1 287 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 CDC40O60508 579 aaKnown RBP eCLIP22.7■■□□□ 1.23
RFFL-206ENST00000447669 NUDT14O95848 222 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 TMED10P49755 219 aaKnown RBP22.7■■□□□ 1.23
RFFL-206ENST00000447669 PSPHP78330 225 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 RELTQ969Z4 430 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 SCNM1Q9BWG6 230 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 METTL7AQ9H8H3 244 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 C20orf141Q9NUB4 165 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 MED11Q9P086 117 aa22.7■■□□□ 1.23
RFFL-206ENST00000447669 SOX14O95416 240 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 CASP3P42574 277 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 CLK3P49761 638 aaKnown RBP22.7■■□□□ 1.22
RFFL-206ENST00000447669 RAD23AP54725 363 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 CLN3Q13286 438 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 ZNF613Q6PF04 617 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 SLC15A4Q8N697 577 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 ACOT11Q8WXI4 607 aaPredicted RBP22.7■■□□□ 1.22
RFFL-206ENST00000447669 MUS81Q96NY9 551 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 RPS6KB2Q9UBS0 482 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 CPAMD8Q8IZJ3 1885 aa22.7■■□□□ 1.22
RFFL-206ENST00000447669 FUT1P19526 365 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ITGA3P26006 1051 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 GPR4P46093 362 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 PDK3Q15120 406 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ZSWIM7Q19AV6 140 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 COL28A1Q2UY09 1125 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ACER2Q5QJU3 275 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 H3F3CQ6NXT2 135 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 MDGA2Q7Z553 956 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ZNF563Q8TA94 476 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 TTC9Q92623 222 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 NPAS1Q99742 590 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 PSD2Q9BQI7 771 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ZNF556Q9HAH1 456 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 ATP13A2Q9NQ11 1180 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 EXOSC3Q9NQT5 275 aaKnown RBP22.69■■□□□ 1.22
RFFL-206ENST00000447669 CCL3P10147 92 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 COPZ1P61923 177 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 NPRL3Q12980 569 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 POMZP3Q6PJE2 187 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 RRM2BQ7LG56 351 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 BEST3Q8N1M1 668 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 NR4A3Q92570 626 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 C3orf49Q96BT1 292 aa22.69■■□□□ 1.22
RFFL-206ENST00000447669 DMXL2Q8TDJ6 3036 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 LOC100130705A0A1B0GUX0 176 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 ARGFXA6NJG6 315 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 OMPP47874 163 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 TMEM236Q5W0B7 351 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 OPN5Q6U736 354 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 RNF138Q8WVD3 245 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 TMEM239Q8WW34 195 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 OIT3Q8WWZ8 545 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 SLC35B4Q969S0 331 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 ANKRD60Q9BZ19 345 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 GRIP2Q9C0E4 1043 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 DSN1Q9H410 356 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 REV1Q9UBZ9 1251 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 AASSQ9UDR5 926 aa22.68■■□□□ 1.22
RFFL-206ENST00000447669 ARRDC5A6NEK1 342 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 A6NL46 340 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 CHP2O43745 196 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 CCNA2P20248 432 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 TBC1D25Q3MII6 688 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 C1orf94Q6P1W5 598 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 MBOAT2Q6ZWT7 520 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 ZNF440Q8IYI8 595 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 ARMC10Q8N2F6 343 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 B4GALNT2Q8NHY0 566 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 UBE2FQ969M7 185 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 DNAJA3Q96EY1 480 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 Q9H521 79 aa22.67■■□□□ 1.22
RFFL-206ENST00000447669 ANKRD19PQ9H560 264 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms