RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PRTFDC1Q9NRG1 225 aa5.53□□□□□ -1.52
PROM1-201ENST00000447510 PNO1Q9NRX1 252 aaKnown RBP5.53□□□□□ -1.52
PROM1-201ENST00000447510 EMC3Q9P0I2 261 aa5.53□□□□□ -1.52
PROM1-201ENST00000447510 PFDN2Q9UHV9 154 aa5.53□□□□□ -1.52
PROM1-201ENST00000447510 HSPE1-MOB4S4R3N1 261 aa5.53□□□□□ -1.52
PROM1-201ENST00000447510 URB1O60287 2271 aaKnown RBP5.53□□□□□ -1.52
PROM1-201ENST00000447510 ADAMTS9Q9P2N4 1935 aa5.53□□□□□ -1.52
PROM1-201ENST00000447510 LRIT2A6NDA9 550 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CHST10O43529 356 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SGCEO43556 437 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 DHFRP00374 187 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CDK1P06493 297 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CD22P20273 847 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 FPR1P21462 350 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HIST1H1TP22492 207 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 MANFP55145 182 aaKnown RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 LGALS3BPQ08380 585 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZNF763Q0D2J5 394 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ERV3-1Q14264 604 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 IL11RAQ14626 422 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 TBCEQ15813 527 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 SWI5Q1ZZU3 235 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZXDCQ2QGD7 858 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 AKIRIN2Q53H80 203 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HLA-DQA1Q5Y7H0 255 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 TMPRSS9Q7Z410 1059 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZFAND4Q86XD8 727 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 LAS2Q8IYD9 372 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZZZ3Q8IYH5 903 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 FTMTQ8N4E7 242 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.52□□□□□ -1.53
PROM1-201ENST00000447510 OR2A5Q96R48 311 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SERINC2Q96SA4 455 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SLC6A15Q9H2J7 730 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PADI2Q9Y2J8 665 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PTRH2Q9Y3E5 179 aaKnown RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 A0A1B0GX78 115 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 TCRBV16S1A1N1A0A5B0 115 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 H3BN98 237 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZNF254O75437 659 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 RGS11O94810 467 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 NPPAP01160 153 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 RAF1P04049 648 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 IL3P08700 152 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HOXD4P09016 255 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 ACSM4P0C7M7 580 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 C8orf89P0DMQ9 161 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ITGAMP11215 1152 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CHI3L1P36222 383 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 HAAOP46952 286 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 RFX3P48380 749 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CENPAP49450 140 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 GBX2P52951 348 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 LIMK1P53667 647 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CDH12P55289 794 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 POLR2GP62487 172 aaKnown RBP eCLIP5.52□□□□□ -1.53
PROM1-201ENST00000447510 ERVK-25P63136 954 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 NKAIN1Q4KMZ8 207 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 RFTN2Q52LD8 501 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 CRTC2Q53ET0 693 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 MANEAQ5SRI9 462 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ABHD17CQ6PCB6 329 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SHQ1Q6PI26 577 aaKnown RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 LRFN4Q6PJG9 635 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 DLEU7Q6UYE1 221 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZNF574Q6ZN55 896 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 MARCH9Q86YJ5 346 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 C9orf62Q8N4C0 152 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 DNAJC22Q8N4W6 341 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 ZFP41Q8N8Y5 198 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 B3GNT7Q8NFL0 401 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SLC41A2Q96JW4 573 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 FEVQ99581 238 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 DPH2Q9BQC3 489 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 GHITMQ9H3K2 345 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 DNAJC27Q9NZQ0 273 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 MKL2Q9ULH7 1088 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 FANCMQ8IYD8 2048 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 WDR87Q6ZQQ6 2873 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PEX12O00623 359 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 P2RX6O15547 441 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PRICKLE3O43900 615 aaPredicted RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 PRMT3O60678 531 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HPGDSO60760 199 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 STK17BO94768 372 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 ANXA3P12429 323 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 BCKDHAP12694 445 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 EPORP19235 508 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 TCN2P20062 427 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 STOMP27105 288 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 OTX2P32243 289 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 FEN1P39748 380 aaKnown RBP5.52□□□□□ -1.53
PROM1-201ENST00000447510 KIR3DL1P43629 444 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 PGDP52209 483 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 CXCR4P61073 352 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 TSPAN5P62079 268 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 SPIBQ01892 262 aa5.52□□□□□ -1.53
PROM1-201ENST00000447510 HSF2Q03933 536 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms