RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 UBE2IP63279 158 aaKnown RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 C2orf69Q8N8R5 385 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 RELL2Q8NC24 303 aaPredicted RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 FLVCR2Q9UPI3 526 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 HTR3BO95264 441 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 MMP3P08254 477 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 FRKP42685 505 aaPredicted RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 STXBP1P61764 594 aaKnown RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 LRRC73Q5JTD7 316 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 MRPL41Q8IXM3 137 aaKnown RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 RNF141Q8WVD5 230 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 SNRPGP15A8MWD9 76 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 VARS2Q5ST30 1063 aaKnown RBP7.4□□□□□ -1.23
SMG1-202ENST00000446231 KLHDC8BQ8IXV7 354 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 HAS2Q92819 552 aa7.4□□□□□ -1.23
SMG1-202ENST00000446231 K7EPK0 472 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SEC14L5O43304 696 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PSMB10P40306 273 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PHYKPLQ8IUZ5 450 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 FAM71E2Q8N5Q1 922 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ZNF563Q8TA94 476 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MALSU1Q96EH3 234 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 CLCC1Q96S66 551 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 C1QTNF2Q9BXJ5 285 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 A4GALTQ9NPC4 353 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ASIC5Q9NY37 505 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 DOCK7Q96N67 2140 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SMIM6P0DI80 62 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 TACR1P25103 407 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 RAP1AP62834 184 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 IL13RA1P78552 427 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 C1GALT1Q9NS00 363 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PMS2P2O95744 297 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 GPX2P18283 190 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PLA2G7Q13093 441 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 VGLL4Q14135 290 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ACOT7LQ6ZUV0 252 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 KDM8Q8N371 416 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 TRIM77I1YAP6 450 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 EMC8O43402 210 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 GPRIN2O60269 458 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ERCC1P07992 297 aaPredicted RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 ZNF823P16415 610 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR1D2P34982 312 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR2W3Q7Z3T1 314 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR2T4Q8NH00 348 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 WDR20Q8TBZ3 569 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SLC25A36Q96CQ1 311 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 DOCK11Q5JSL3 2073 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MEIKINA0A087WXM9 373 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 FAM171A2A8MVW0 826 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 DSCR3O14972 297 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ACP5P13686 325 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 UNQ6126/PRO20091Q6UXV3 157 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 FAM83HQ6ZRV2 1179 aaPredicted RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR51L1Q8NGJ5 315 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SGK3Q96BR1 496 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ZDHHC5Q9C0B5 715 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 CDHR4A6H8M9 788 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 RAB13P51153 203 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 CLCN7P51798 805 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SNTB1Q13884 538 aaKnown RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 IRF4Q15306 451 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PKDCCQ504Y2 493 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 TMEM150AQ86TG1 271 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 FNDC9Q8TBE3 224 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 C1QTNF3Q9BXJ4 246 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 RAB40ALP0C0E4 278 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SPNS2Q8IVW8 549 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 RAB40AQ8WXH6 277 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 LIN37Q96GY3 246 aaPredicted RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 A0A1W2PS29 197 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SLC6A1P30531 599 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 HENMT1Q5T8I9 393 aaKnown RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 NXPE4Q6UWF7 544 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 CHAC2Q8WUX2 184 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SAMD11Q96NU1 681 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ZNF208O43345 1280 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ADH1AP07327 375 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ITGA5P08648 1049 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 ZNF101Q8IZC7 436 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 GKN1Q9NS71 199 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PLAGL1Q9UM63 463 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 RBMXL2O75526 392 aaKnown RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 MGMTP16455 207 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 BVESQ8NE79 360 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 OR52N1Q8NH53 320 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 TBC1D20Q96BZ9 403 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 C4orf36Q96KX1 117 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MARVELD1Q9BSK0 173 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 EGLN3Q9H6Z9 239 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MED17Q9NVC6 651 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 J3KTA2 159 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 SRPX2O60687 465 aaPredicted RBP7.39□□□□□ -1.23
SMG1-202ENST00000446231 GPR37L1O60883 481 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 MTHFD2P13995 350 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 GABRA3P34903 492 aa7.39□□□□□ -1.23
SMG1-202ENST00000446231 PLA2G15Q8NCC3 412 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms